; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011226 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011226
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein, related
Genome locationchr12:13163821..13164636
RNA-Seq ExpressionPI0011226
SyntenyPI0011226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040963.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.1e-0740.78Show/hide
Query:  GSASSRENQNNFRNSFSKRKETERNND-------FKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQAL
        G  +   NQ   RN +S  +    N+D        KK+GD   F+CREC G G+YQ EC+TFLR+Q+K + VTLSD+E   S DS D+ G+   F ++ +
Subjt:  GSASSRENQNNFRNSFSKRKETERNND-------FKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQAL

Query:  WKT
         +T
Subjt:  WKT

KAA0041781.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.0e-0745.95Show/hide
Query:  KKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQNPKE
        KK+GD   F+CRECGG G+YQ++C TFLR+Q+K + VTLSD+E   S DS D+ G+   F ++   + + +  E
Subjt:  KKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQNPKE

KAA0048232.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.2e-0647.73Show/hide
Query:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT
        N  S + R N+N+ R S    K        KKDGD   FKCRECGG G+YQ EC TF+R+Q+K + VTLSD+ES  S D  D   + T
Subjt:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT

KAA0060361.1 gag-pol polyprotein, related [Cucumis melo var. makuwa]8.3e-0844.66Show/hide
Query:  NYGSASSRENQNNFRNS--FSKRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQN
        N   ++ R NQN  R S  + K+KE +R         F+CRECGG G+YQ+EC TFLR Q+K + VTLSD+ESES +D        T   L+ALWK    
Subjt:  NYGSASSRENQNNFRNS--FSKRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQN

Query:  PKE
         +E
Subjt:  PKE

TYK02457.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.2e-0655.93Show/hide
Query:  KRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSE
        KRK TE        G FKCRECGG G+YQ+EC T+LR+Q+K + VTLSD+ES  S D +
Subjt:  KRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSE

TrEMBL top hitse value%identityAlignment
A0A5A7TCV9 Gag-pol polyprotein2.0e-0740.78Show/hide
Query:  GSASSRENQNNFRNSFSKRKETERNND-------FKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQAL
        G  +   NQ   RN +S  +    N+D        KK+GD   F+CREC G G+YQ EC+TFLR+Q+K + VTLSD+E   S DS D+ G+   F ++ +
Subjt:  GSASSRENQNNFRNSFSKRKETERNND-------FKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQAL

Query:  WKT
         +T
Subjt:  WKT

A0A5A7TJI2 Gag-pol polyprotein3.4e-0745.95Show/hide
Query:  KKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQNPKE
        KK+GD   F+CRECGG G+YQ++C TFLR+Q+K + VTLSD+E   S DS D+ G+   F ++   + + +  E
Subjt:  KKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQNPKE

A0A5A7TXI4 Gag-pol polyprotein5.8e-0747.73Show/hide
Query:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT
        N  S + R N+N+ R S    K        KKDGD   FKCRECGG G+YQ EC TF+R+Q+K + VTLSD+ES  S D  D   + T
Subjt:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT

A0A5A7V3Q5 Gag-pol polyprotein, related4.0e-0844.66Show/hide
Query:  NYGSASSRENQNNFRNS--FSKRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQN
        N   ++ R NQN  R S  + K+KE +R         F+CRECGG G+YQ+EC TFLR Q+K + VTLSD+ESES +D        T   L+ALWK    
Subjt:  NYGSASSRENQNNFRNS--FSKRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQN

Query:  PKE
         +E
Subjt:  PKE

A0A5D3C7Z7 Gag-pol polyprotein5.8e-0747.73Show/hide
Query:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT
        N  S + R N+N+ R S    K        KKDGD   FKCRECGG G+YQ EC TF+R+Q+K + VTLSD+ES  S D  D   + T
Subjt:  NYGSASSRENQNNFRNSFSKRKETERNNDFKKDGD---FKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTATGGATCTGCATCTAGTCGTGAGAATCAAAACAATTTCCGAAACTCTTTTTCCAAAAGAAAAGAAACTGAGCGAAATAATGATTTTAAAAAAGATGGAGATTT
CAAATGTAGAGAATGTGGTGGAAAAGGGAATTATCAATCTGAGTGTGCTACTTTCCTGAGACGACAACGCAAAGGGTACTCAGTCACATTATCTGATGATGAGTCTGAGT
CAAGTCATGACTCTGAGGATGAGAGTGGGTCACAAACGACCTTTTTGTTACAAGCTTTATGGAAAACCTCACAAAATCCAAAGGAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTATGGATCTGCATCTAGTCGTGAGAATCAAAACAATTTCCGAAACTCTTTTTCCAAAAGAAAAGAAACTGAGCGAAATAATGATTTTAAAAAAGATGGAGATTT
CAAATGTAGAGAATGTGGTGGAAAAGGGAATTATCAATCTGAGTGTGCTACTTTCCTGAGACGACAACGCAAAGGGTACTCAGTCACATTATCTGATGATGAGTCTGAGT
CAAGTCATGACTCTGAGGATGAGAGTGGGTCACAAACGACCTTTTTGTTACAAGCTTTATGGAAAACCTCACAAAATCCAAAGGAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MNYGSASSRENQNNFRNSFSKRKETERNNDFKKDGDFKCRECGGKGNYQSECATFLRRQRKGYSVTLSDDESESSHDSEDESGSQTTFLLQALWKTSQNPKEKK