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PI0011229 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011229
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr04:17269018..17270317
RNA-Seq ExpressionPI0011229
SyntenyPI0011229
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.1e-4576.67Show/hide
Query:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG
        RSN  RLRDVADDSQQVLDICNNN+R++EEIH+MY +PIVPP +HRGRV+VEEAELDEVYHNVEE+ P TQ Q+QTGYGSP++MM  FG GY DFEV T 
Subjt:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG

Query:  YYDSGVGPSFSYIDARPSTS
        YYDSGVGPS SY+D  PSTS
Subjt:  YYDSGVGPSFSYIDARPSTS

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-4677.05Show/hide
Query:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE
        + H RSN  RLRDVADD QQVL+ICNNN+RY+EEIH+MYD+ IVPP VHRGRVRVEEAELDEVYHNVEEVPP TQTQSQTGYGSP+ MM  FGAGY+D E
Subjt:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE

Query:  VGTGYYDSGVGPSFSYIDARPS
        VGTGYYD+G+ PS  Y+D  PS
Subjt:  VGTGYYDSGVGPSFSYIDARPS

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-4680Show/hide
Query:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG
        RSN  RLRDVADD QQ LDICNNNERY+EEIH+MYD+PIVPP VHRG VRVEEAELD+VYHNVEEVP  TQTQSQTGYGSP+ MM  F AGY DFEVG G
Subjt:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG

Query:  YYDSGVGPSFSYIDARPSTS
        YYD+GVGPS SY+D  PSTS
Subjt:  YYDSGVGPSFSYIDARPSTS

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.2e-4775.19Show/hide
Query:  ILSPIINHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAG
        ++  ++N  RSN  RLRDVADD QQ LDICNNNERY+EEIH+MYD+PIVPP VHRG VRVEEAELD+VYHNVEEVP  TQTQSQTGYGSP+ MM  F AG
Subjt:  ILSPIINHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAG

Query:  YFDFEVGTGYYDSGVGPSFSYIDARPSTS
        Y DFEVG GYYD+GVGPS SY+D  PSTS
Subjt:  YFDFEVGTGYYDSGVGPSFSYIDARPSTS

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-4677.05Show/hide
Query:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE
        + H RSN  RLRDVADD QQVL+ICNNN+RY+EEIH+MYD+ IVPP VHRGRVRVEEAELDEVYHNVEEVPP TQTQSQTGYGSP+ MM  FGAGY+D E
Subjt:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE

Query:  VGTGYYDSGVGPSFSYIDARPS
        VGTGYYD+G+ PS  Y+D  PS
Subjt:  VGTGYYDSGVGPSFSYIDARPS

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.0e-4576.67Show/hide
Query:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG
        RSN  RLRDVADDSQQVLDICNNN+R++EEIH+MY +PIVPP +HRGRV+VEEAELDEVYHNVEE+ P TQ Q+QTGYGSP++MM  FG GY DFEV T 
Subjt:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG

Query:  YYDSGVGPSFSYIDARPSTS
        YYDSGVGPS SY+D  PSTS
Subjt:  YYDSGVGPSFSYIDARPSTS

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.4e-4777.05Show/hide
Query:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE
        + H RSN  RLRDVADD QQVL+ICNNN+RY+EEIH+MYD+ IVPP VHRGRVRVEEAELDEVYHNVEEVPP TQTQSQTGYGSP+ MM  FGAGY+D E
Subjt:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE

Query:  VGTGYYDSGVGPSFSYIDARPS
        VGTGYYD+G+ PS  Y+D  PS
Subjt:  VGTGYYDSGVGPSFSYIDARPS

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-4680Show/hide
Query:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG
        RSN  RLRDVADD QQ LDICNNNERY+EEIH+MYD+PIVPP VHRG VRVEEAELD+VYHNVEEVP  TQTQSQTGYGSP+ MM  F AGY DFEVG G
Subjt:  RSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTG

Query:  YYDSGVGPSFSYIDARPSTS
        YYD+GVGPS SY+D  PSTS
Subjt:  YYDSGVGPSFSYIDARPSTS

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.1e-4775.19Show/hide
Query:  ILSPIINHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAG
        ++  ++N  RSN  RLRDVADD QQ LDICNNNERY+EEIH+MYD+PIVPP VHRG VRVEEAELD+VYHNVEEVP  TQTQSQTGYGSP+ MM  F AG
Subjt:  ILSPIINHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAG

Query:  YFDFEVGTGYYDSGVGPSFSYIDARPSTS
        Y DFEVG GYYD+GVGPS SY+D  PSTS
Subjt:  YFDFEVGTGYYDSGVGPSFSYIDARPSTS

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.4e-4777.05Show/hide
Query:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE
        + H RSN  RLRDVADD QQVL+ICNNN+RY+EEIH+MYD+ IVPP VHRGRVRVEEAELDEVYHNVEEVPP TQTQSQTGYGSP+ MM  FGAGY+D E
Subjt:  INHQRSNKRRLRDVADDSQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFE

Query:  VGTGYYDSGVGPSFSYIDARPS
        VGTGYYD+G+ PS  Y+D  PS
Subjt:  VGTGYYDSGVGPSFSYIDARPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACTGTGGTAGAGGCATGCGTCTGACCACCAGACTGGTCAGAGAAGACATGTCAAGCACGAGAGGAGAAGATCGGACTGCATCTGAATGCATGCTGATTGGAGG
AGACGCATCGAGAACGGGAGGAGGACAAAAAGGCGAAGAGAGGAACATTAGGCGAGCAACATTGCATTTAGGCGATCAAAAAGCATCTGGCGGACAGCCAGTACAACACT
ATGCGATGCTGACTTGCTACAAGACAAAAATGCTTCAATCCTCCATCCTTTCTCCAATCATCAATCATCAGAGATCGAACAAAAGAAGACTTCGTGATGTTGCAGATGAT
TCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACGTGGAGGAGATACATCATATGTACGATGTACCTATTGTACCTCCATCAGTTCATAGGGGACGTGTTCG
AGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGGTGATGATGATGTTGG
CATTTGGAGCAGGATATTTTGATTTTGAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTTTTCATACATAGATGCCAGACCATCAACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACTGTGGTAGAGGCATGCGTCTGACCACCAGACTGGTCAGAGAAGACATGTCAAGCACGAGAGGAGAAGATCGGACTGCATCTGAATGCATGCTGATTGGAGG
AGACGCATCGAGAACGGGAGGAGGACAAAAAGGCGAAGAGAGGAACATTAGGCGAGCAACATTGCATTTAGGCGATCAAAAAGCATCTGGCGGACAGCCAGTACAACACT
ATGCGATGCTGACTTGCTACAAGACAAAAATGCTTCAATCCTCCATCCTTTCTCCAATCATCAATCATCAGAGATCGAACAAAAGAAGACTTCGTGATGTTGCAGATGAT
TCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACGTGGAGGAGATACATCATATGTACGATGTACCTATTGTACCTCCATCAGTTCATAGGGGACGTGTTCG
AGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGGTGATGATGATGTTGG
CATTTGGAGCAGGATATTTTGATTTTGAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTTTTCATACATAGATGCCAGACCATCAACTTCTTAA
Protein sequenceShow/hide protein sequence
MQDCGRGMRLTTRLVREDMSSTRGEDRTASECMLIGGDASRTGGGQKGEERNIRRATLHLGDQKASGGQPVQHYAMLTCYKTKMLQSSILSPIINHQRSNKRRLRDVADD
SQQVLDICNNNERYVEEIHHMYDVPIVPPSVHRGRVRVEEAELDEVYHNVEEVPPVTQTQSQTGYGSPVMMMLAFGAGYFDFEVGTGYYDSGVGPSFSYIDARPSTS