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PI0011257 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011257
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr11:12428071..12428827
RNA-Seq ExpressionPI0011257
SyntenyPI0011257
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]1.6e-4455.15Show/hide
Query:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF
        +ND +T+AL Q  +DI+KNGVLEK+   G+F VPCSI  MDLG  LCDL ASINLMPLSIFKKLK+ EVQPTH+R Q ADRSI  P+GKIEDVLVKVDKF
Subjt:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF

Query:  LFSTDFVILDYEADREA---IESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
        LF  DF+ILDYEAD E    +  L     +   Y        FF  ++  +     N+++  +      L  +SEK TKPS+ EP ELELKPLP
Subjt:  LFSTDFVILDYEADREA---IESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]1.8e-4358.72Show/hide
Query:  GVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEADREAIE
        G  EKI D  + T+P SI +M L RAL DL+ SINLMPLSI KKL++GEVQ  H+RLQ A+RSI  PEGKIE+    +D                  AIE
Subjt:  GVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEADREAIE

Query:  SLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
         LGWDYC+E+AY ELFS ++F EE+ P YILKEVN VSGK K +SLDLQTK E KT+ SIEEP +LELKPLP
Subjt:  SLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

KAA0045332.1 uncharacterized protein E6C27_scaffold316G001060 [Cucumis melo var. makuwa]3.4e-5063.33Show/hide
Query:  VALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDF
        VALTQ  ND+FKN +LEK+ID G+F VPC IG MDLG A+CDL+ASINLMPLSIF KLK+GE+QPTH+RLQF +RSI   E KIEDVLVK   FL ST  
Subjt:  VALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDF

Query:  VILD-YEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSEL
         ++D ++ +     +    YCKE+AY ELFS E+FFEEEDP+YIL+EVN +S ++K KSLD QTK +KKTKPS EE  EL
Subjt:  VILD-YEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSEL

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]6.9e-5162.92Show/hide
Query:  NDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEA
        +DIFKNG+ EK+ +  +FTVPCSIGEMDLGRALC+L+ SINLM LSIFKKL++ EVQPTHIRL FAD+ I  PE KI+D         F TD      + 
Subjt:  NDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEA

Query:  DREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
        +   IE LGW+Y +++AY ELFS E+FFEE+DP+YILKEVN+VS ++K +SLDLQ K EKKTKPSIEEP ELELK LP
Subjt:  DREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

KAA0066938.1 uncharacterized protein E6C27_scaffold550G00700 [Cucumis melo var. makuwa]1.3e-4661.68Show/hide
Query:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF
        MNDCETVALTQ  +++FKNGV +K+ D  +F V C IG MDLGRALCD+  S  LMPL IFKKL++GEVQPTH+R+QFA+RSI  PEGKIEDVLVKVDKF
Subjt:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF

Query:  LFSTDFVILDYEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDL
        LFS  FVILDY  + E     G     +K+     + +  FEEEDP Y+L+EV+ VSG RK KSLDL
Subjt:  LFSTDFVILDYEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDL

TrEMBL top hitse value%identityAlignment
A0A5A7TPP0 Uncharacterized protein1.7e-5063.33Show/hide
Query:  VALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDF
        VALTQ  ND+FKN +LEK+ID G+F VPC IG MDLG A+CDL+ASINLMPLSIF KLK+GE+QPTH+RLQF +RSI   E KIEDVLVK   FL ST  
Subjt:  VALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDF

Query:  VILD-YEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSEL
         ++D ++ +     +    YCKE+AY ELFS E+FFEEEDP+YIL+EVN +S ++K KSLD QTK +KKTKPS EE  EL
Subjt:  VILD-YEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSEL

A0A5A7UF79 Uncharacterized protein3.3e-5162.92Show/hide
Query:  NDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEA
        +DIFKNG+ EK+ +  +FTVPCSIGEMDLGRALC+L+ SINLM LSIFKKL++ EVQPTHIRL FAD+ I  PE KI+D         F TD      + 
Subjt:  NDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEA

Query:  DREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
        +   IE LGW+Y +++AY ELFS E+FFEE+DP+YILKEVN+VS ++K +SLDLQ K EKKTKPSIEEP ELELK LP
Subjt:  DREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

A0A5D3BDT2 RT_RNaseH domain-containing protein8.0e-4555.15Show/hide
Query:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF
        +ND +T+AL Q  +DI+KNGVLEK+   G+F VPCSI  MDLG  LCDL ASINLMPLSIFKKLK+ EVQPTH+R Q ADRSI  P+GKIEDVLVKVDKF
Subjt:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF

Query:  LFSTDFVILDYEADREA---IESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
        LF  DF+ILDYEAD E    +  L     +   Y        FF  ++  +     N+++  +      L  +SEK TKPS+ EP ELELKPLP
Subjt:  LFSTDFVILDYEADREA---IESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein8.8e-4458.72Show/hide
Query:  GVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEADREAIE
        G  EKI D  + T+P SI +M L RAL DL+ SINLMPLSI KKL++GEVQ  H+RLQ A+RSI  PEGKIE+    +D                  AIE
Subjt:  GVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILDYEADREAIE

Query:  SLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP
         LGWDYC+E+AY ELFS ++F EE+ P YILKEVN VSGK K +SLDLQTK E KT+ SIEEP +LELKPLP
Subjt:  SLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLP

A0A5D3E346 Uncharacterized protein6.5e-4761.68Show/hide
Query:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF
        MNDCETVALTQ  +++FKNGV +K+ D  +F V C IG MDLGRALCD+  S  LMPL IFKKL++GEVQPTH+R+QFA+RSI  PEGKIEDVLVKVDKF
Subjt:  MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKF

Query:  LFSTDFVILDYEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDL
        LFS  FVILDY  + E     G     +K+     + +  FEEEDP Y+L+EV+ VSG RK KSLDL
Subjt:  LFSTDFVILDYEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTGCGAGACAGTGGCTCTAACGCAGGTAATAAACGACATCTTCAAAAATGGGGTACTAGAGAAGATAATAGATTCTGGTAACTTCACGGTACCTTGTTCAAT
AGGCGAAATGGATCTAGGTCGCGCGTTATGTGACTTGCAGGCGAGCATCAATTTGATGCCTCTTTCTATCTTCAAAAAATTAAAGATGGGGGAGGTTCAACCAACTCACA
TAAGACTCCAATTTGCTGACAGATCCATTGTCACGCCTGAGGGCAAAATTGAAGATGTTTTGGTTAAGGTGGACAAGTTCTTGTTCTCCACCGACTTCGTCATTCTAGAT
TACGAAGCGGATCGAGAGGCGATAGAATCCCTTGGGTGGGACTATTGCAAGGAAAAAGCATATTCTGAACTGTTTAGCCCTGAAAAATTCTTTGAAGAGGAAGATCCCAA
TTATATTCTGAAAGAAGTGAACATCGTGTCTGGCAAAAGGAAGTTAAAGTCTTTGGATCTGCAAACCAAAAGCGAGAAGAAGACAAAGCCATCAATTGAAGAACCATCAG
AGCTAGAGCTAAAGCCTTTGCCACCACCTGAAATATGCATATTTAGGGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTGCGAGACAGTGGCTCTAACGCAGGTAATAAACGACATCTTCAAAAATGGGGTACTAGAGAAGATAATAGATTCTGGTAACTTCACGGTACCTTGTTCAAT
AGGCGAAATGGATCTAGGTCGCGCGTTATGTGACTTGCAGGCGAGCATCAATTTGATGCCTCTTTCTATCTTCAAAAAATTAAAGATGGGGGAGGTTCAACCAACTCACA
TAAGACTCCAATTTGCTGACAGATCCATTGTCACGCCTGAGGGCAAAATTGAAGATGTTTTGGTTAAGGTGGACAAGTTCTTGTTCTCCACCGACTTCGTCATTCTAGAT
TACGAAGCGGATCGAGAGGCGATAGAATCCCTTGGGTGGGACTATTGCAAGGAAAAAGCATATTCTGAACTGTTTAGCCCTGAAAAATTCTTTGAAGAGGAAGATCCCAA
TTATATTCTGAAAGAAGTGAACATCGTGTCTGGCAAAAGGAAGTTAAAGTCTTTGGATCTGCAAACCAAAAGCGAGAAGAAGACAAAGCCATCAATTGAAGAACCATCAG
AGCTAGAGCTAAAGCCTTTGCCACCACCTGAAATATGCATATTTAGGGGAGAATGA
Protein sequenceShow/hide protein sequence
MNDCETVALTQVINDIFKNGVLEKIIDSGNFTVPCSIGEMDLGRALCDLQASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVTPEGKIEDVLVKVDKFLFSTDFVILD
YEADREAIESLGWDYCKEKAYSELFSPEKFFEEEDPNYILKEVNIVSGKRKLKSLDLQTKSEKKTKPSIEEPSELELKPLPPPEICIFRGE