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PI0011285 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011285
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:20471007..20471204
RNA-Seq ExpressionPI0011285
SyntenyPI0011285
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035002.1 polyprotein [Cucumis melo var. makuwa]1.0e-1155.22Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKN---PSKGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        MELIKD+DCTIVYH  KAN+V D LSRK+    S GR+ALL+E R  K+ +++G+VG+ +A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKN---PSKGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-1565.67Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        MELIKDY+ TI YHPGKAN+V +ALSRKNPS   KGR+A ++E R CK ILN G  GNLIA F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]2.4e-1362.69Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        M+LIKDYDCTI YH GKAN++ DALS K PS   +GR+ALLRE +G K IL A T GNL+A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]8.3e-1467.19Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFR
        MELIKDYDCTI+YH GKAN+  DALSRK+ S   KG++ALL E R CK ILNA  +GNLIA F+
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFR

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]2.4e-1359.7Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        M+LIKDYDCTI Y+P K N++ DALSRK+ S   KGR+ALL++ RG K +LNAGT GN +A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

TrEMBL top hitse value%identityAlignment
A0A5A7SUU4 Polyprotein4.9e-1255.22Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKN---PSKGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        MELIKD+DCTIVYH  KAN+V D LSRK+    S GR+ALL+E R  K+ +++G+VG+ +A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKN---PSKGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

A0A5A7UMR3 DNA/RNA polymerases superfamily protein7.3e-1665.67Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        MELIKDY+ TI YHPGKAN+V +ALSRKNPS   KGR+A ++E R CK ILN G  GNLIA F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

A0A5A7UWA6 CCHC-type integrase1.2e-1362.69Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        M+LIKDYDCTI YH GKAN++ DALS K PS   +GR+ALLRE +G K IL A T GNL+A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

A0A5A7VIK8 Polyprotein1.2e-1359.7Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP
        M+LIKDYDCTI Y+P K N++ DALSRK+ S   KGR+ALL++ RG K +LNAGT GN +A F++ P
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFRLSP

A0A5D3DMM3 CCHC-type integrase4.0e-1467.19Show/hide
Query:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFR
        MELIKDYDCTI+YH GKAN+  DALSRK+ S   KG++ALL E R CK ILNA  +GNLIA F+
Subjt:  MELIKDYDCTIVYHPGKANMVVDALSRKNPS---KGRVALLREFRGCKAILNAGTVGNLIAHFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTCATTAAGGATTATGATTGCACTATCGTCTATCACCCTGGAAAAGCTAACATGGTAGTTGACGCGTTGAGTAGAAAGAACCCTAGTAAAGGAAGAGTAGCCTT
GCTAAGGGAATTTAGAGGTTGCAAGGCGATCTTAAATGCAGGAACAGTGGGAAATTTGATAGCTCATTTCAGGTTAAGCCCACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTCATTAAGGATTATGATTGCACTATCGTCTATCACCCTGGAAAAGCTAACATGGTAGTTGACGCGTTGAGTAGAAAGAACCCTAGTAAAGGAAGAGTAGCCTT
GCTAAGGGAATTTAGAGGTTGCAAGGCGATCTTAAATGCAGGAACAGTGGGAAATTTGATAGCTCATTTCAGGTTAAGCCCACATTAG
Protein sequenceShow/hide protein sequence
MELIKDYDCTIVYHPGKANMVVDALSRKNPSKGRVALLREFRGCKAILNAGTVGNLIAHFRLSPH