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PI0011311 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011311
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:21101928..21102479
RNA-Seq ExpressionPI0011311
SyntenyPI0011311
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]7.7e-5776.43Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSAYQY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK
          +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSKIFP+ FNFLPEDL+K
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.3e-5676.43Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSA QYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP   + QM+PPASP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFPE FNFLPEDLRK
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.8e-5677.22Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SA QYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPSS + QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +E VSKIFPE FNFL EDLRKT
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]6.5e-4876.87Show/hide
Query:  MSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD
        MSA QYAMDLGFTTVTRS++RSS IRIES TESSTPPRPSANL+RP     QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK + +YD
Subjt:  MSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD

Query:  PIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT
         IIEPEYQS+TL++ VSKIF ++FN LPEDLRKT
Subjt:  PIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]7.2e-5577.12Show/hide
Query:  RVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAP
        R +STSS+G+R SSS N APSPMSA QYAMDLGFTTVTRS+ARSS I+I SPT+SSTPPR SANL+RPSSE+ QMRP ASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDL
        +KRF+PR EIK+YFQK V +YD IIEPEYQSLTL+E VSKIFP++FNFLP+DL
Subjt:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.8e-5677.22Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SA QYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPSS + QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +E VSKIFPE FNFL EDLRKT
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT

A0A5D3BM67 Uncharacterized protein3.1e-4876.87Show/hide
Query:  MSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD
        MSA QYAMDLGFTTVTRS++RSS IRIES TESSTPPRPSANL+RP     QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK + +YD
Subjt:  MSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD

Query:  PIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT
         IIEPEYQS+TL++ VSKIF ++FN LPEDLRKT
Subjt:  PIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKT

A0A5D3DHH1 Uncharacterized protein3.8e-4670.32Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESST-PPTTYSQA
        RGR +STSSKG+R SSS N  PS +SAYQYA+DLGFT VTRS++R  GI I S TESSTP RPSANL+RPS E+ QMR  ASP SN+ESST PPTTYSQA
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESST-PPTTYSQA

Query:  VAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDE-RVSKIFPESFNFLPE
        V P+KRF+PRPE KTYF+K + +Y P IE EYQ+LTL+E  VSKIFP+ FNFLPE
Subjt:  VAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDE-RVSKIFPESFNFLPE

A0A5D3E4J4 Uncharacterized protein6.3e-5776.43Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSA QYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP   + QM+PPASP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFPE FNFLPEDLRK
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK

E5GCE6 Uncharacterized protein3.7e-5776.43Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSAYQY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPS  + QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK
          +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSKIFP+ FNFLPEDL+K
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTGTGCAAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCATATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTAGCGAAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGAGAGTTTC
AAAAATTTTCCCTGAGAGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACATGCCCGAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTGTGCAAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCATATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTAGCGAAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGAGAGTTTC
AAAAATTTTCCCTGAGAGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACATGCCCGAT
AA
Protein sequenceShow/hide protein sequence
MSIVQGRGRVSSTSSKGSRLSSSQNPAPSPMSAYQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSSEITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDERVSKIFPESFNFLPEDLRKTILRVYSSRHKVCRNNSHAR