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PI0011432 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011432
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr12:19855567..19856547
RNA-Seq ExpressionPI0011432
SyntenyPI0011432
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041656.1 uncharacterized protein E6C27_scaffold93G001360 [Cucumis melo var. makuwa]6.3e-1936.77Show/hide
Query:  VHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV--------------------------------------
        VHIRG +FK+S +I N FL + +  SS     + + L   L+  TL VW  NG IL VSLSV                                      
Subjt:  VHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV--------------------------------------

Query:  ---------NLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAA
                 NLLIH N  IL A DAP P PK LS+SYR FQGSH  +L    +P        T ++N    G  +P  LA RI S LT  S+ L  S   
Subjt:  ---------NLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAA

Query:  LTERHFKVDALLRHLKALLPSSS
        L++R  +VD+L+ HLK L+PS S
Subjt:  LTERHFKVDALLRHLKALLPSSS

KAA0053607.1 uncharacterized protein E6C27_scaffold190G001830 [Cucumis melo var. makuwa]1.1e-1834.56Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS
        +IVHIRG  F +S S+ N FL + +         T E L   L+ GTL  W  NG                                       QI    
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS

Query:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF
        L  +LL+H N  +L A DAP P PKT+++SYR FQGSH  D+     P        T + +    G  +   LA RI + LT ES+ L NS   L+ER  
Subjt:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF

Query:  KVDALLRHLKALLPSSS
        +VDAL+RHLK+  PS+S
Subjt:  KVDALLRHLKALLPSSS

KAA0066862.1 uncharacterized protein E6C27_scaffold271G002650 [Cucumis melo var. makuwa]2.8e-1935.75Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSVN-----------------------------LLIHQN
        + VHIRG  F +  ++ N FL +++         T E L   L+GGTL+ W  NG I  V+LSV                              LL+H N
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSVN-----------------------------LLIHQN

Query:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK
          +L A DAP P PKT+++SYR FQGSH  ++     P  G     T + +    G  +   LA  I + LT ES+ L NS   L+ER  +VDAL+RHLK
Subjt:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK

Query:  ALLPSSS
        +  PS+S
Subjt:  ALLPSSS

XP_008437685.1 PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo]3.7e-1935.27Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV-----------------------------NLLIHQN
        ++VHI+G  F +SS++ N FL + +  +    S +   L   L GGTL+ W  NG I  V+LSV                              LL+H N
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV-----------------------------NLLIHQN

Query:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK
          +L   DAPGP PKTLS+SYR FQG H  D+        G     T + +  T+   I   LA+RIF+ LT ES+ L  +   ++ER  ++D+L+RHLK
Subjt:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK

Query:  ALLPSSS
           PS S
Subjt:  ALLPSSS

XP_008460447.1 PREDICTED: uncharacterized protein LOC103499259 [Cucumis melo]1.1e-1834.56Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS
        +IVHIRG  F +S S+ N FL + +         T E L   L+ GTL  W  NG                                       QI    
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS

Query:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF
        L  +LL+H N  +L A DAP P PKT+++SYR FQGSH  D+     P        T + +    G  +   LA RI + LT ES+ L NS   L+ER  
Subjt:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF

Query:  KVDALLRHLKALLPSSS
        +VDAL+RHLK+  PS+S
Subjt:  KVDALLRHLKALLPSSS

TrEMBL top hitse value%identityAlignment
A0A1S3AV82 uncharacterized protein LOC1034830261.8e-1935.27Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV-----------------------------NLLIHQN
        ++VHI+G  F +SS++ N FL + +  +    S +   L   L GGTL+ W  NG I  V+LSV                              LL+H N
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV-----------------------------NLLIHQN

Query:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK
          +L   DAPGP PKTLS+SYR FQG H  D+        G     T + +  T+   I   LA+RIF+ LT ES+ L  +   ++ER  ++D+L+RHLK
Subjt:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK

Query:  ALLPSSS
           PS S
Subjt:  ALLPSSS

A0A1S3CC22 uncharacterized protein LOC1034992595.2e-1934.56Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS
        +IVHIRG  F +S S+ N FL + +         T E L   L+ GTL  W  NG                                       QI    
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS

Query:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF
        L  +LL+H N  +L A DAP P PKT+++SYR FQGSH  D+     P        T + +    G  +   LA RI + LT ES+ L NS   L+ER  
Subjt:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF

Query:  KVDALLRHLKALLPSSS
        +VDAL+RHLK+  PS+S
Subjt:  KVDALLRHLKALLPSSS

A0A5A7THX8 Uncharacterized protein3.0e-1936.77Show/hide
Query:  VHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV--------------------------------------
        VHIRG +FK+S +I N FL + +  SS     + + L   L+  TL VW  NG IL VSLSV                                      
Subjt:  VHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSV--------------------------------------

Query:  ---------NLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAA
                 NLLIH N  IL A DAP P PK LS+SYR FQGSH  +L    +P        T ++N    G  +P  LA RI S LT  S+ L  S   
Subjt:  ---------NLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAA

Query:  LTERHFKVDALLRHLKALLPSSS
        L++R  +VD+L+ HLK L+PS S
Subjt:  LTERHFKVDALLRHLKALLPSSS

A0A5A7UGJ3 Uncharacterized protein5.2e-1934.56Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS
        +IVHIRG  F +S S+ N FL + +         T E L   L+ GTL  W  NG                                       QI    
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNG---------------------------------------QILVVS

Query:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF
        L  +LL+H N  +L A DAP P PKT+++SYR FQGSH  D+     P        T + +    G  +   LA RI + LT ES+ L NS   L+ER  
Subjt:  LSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHF

Query:  KVDALLRHLKALLPSSS
        +VDAL+RHLK+  PS+S
Subjt:  KVDALLRHLKALLPSSS

A0A5D3DXM9 Uncharacterized protein1.4e-1935.75Show/hide
Query:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSVN-----------------------------LLIHQN
        + VHIRG  F +  ++ N FL +++         T E L   L+GGTL+ W  NG I  V+LSV                              LL+H N
Subjt:  EIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSVN-----------------------------LLIHQN

Query:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK
          +L A DAP P PKT+++SYR FQGSH  ++     P  G     T + +    G  +   LA  I + LT ES+ L NS   L+ER  +VDAL+RHLK
Subjt:  FGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQPPHGHT--STKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLK

Query:  ALLPSSS
        +  PS+S
Subjt:  ALLPSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTGTTCATATACGTGGATCTGTTTTTAAGCTTTCTTCGTCCATCTTTAATGATTTCCTTGACCATCATCTACCACACTCCTCTCCTCTTCCATCGCTTACACC
AGAAGCTTTGACTTTTGAATTAACTGGAGGCACACTTAATGTCTGGGCCTCAAATGGTCAAATTCTTGTCGTTTCCCTTAGTGTCAATCTGCTCATTCATCAAAATTTTG
GAATTCTTTTAGCTTTTGATGCTCCCGGGCCTGCTCCAAAAACCTTGTCTGTGAGTTACAGATTTTTCCAAGGCTCCCATACGCTTGATCTTGCTCCTTCTAACCAACCT
CCGCATGGTCATACTTCTACTAAGAATGTCAATATTCCAACTAATGGCCTTCTTATACCTCCTTCCTTGGCATTCAGGATCTTTAGCCTTCTGACTACTGAGTCTCAAGT
TTTGGGTAATTCTAGTGCTGCCTTAACTGAGAGACATTTCAAAGTAGATGCCCTACTTCGACATTTAAAGGCTCTGCTTCCATCTTCAAGCTCTTCCACAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTGTTCATATACGTGGATCTGTTTTTAAGCTTTCTTCGTCCATCTTTAATGATTTCCTTGACCATCATCTACCACACTCCTCTCCTCTTCCATCGCTTACACC
AGAAGCTTTGACTTTTGAATTAACTGGAGGCACACTTAATGTCTGGGCCTCAAATGGTCAAATTCTTGTCGTTTCCCTTAGTGTCAATCTGCTCATTCATCAAAATTTTG
GAATTCTTTTAGCTTTTGATGCTCCCGGGCCTGCTCCAAAAACCTTGTCTGTGAGTTACAGATTTTTCCAAGGCTCCCATACGCTTGATCTTGCTCCTTCTAACCAACCT
CCGCATGGTCATACTTCTACTAAGAATGTCAATATTCCAACTAATGGCCTTCTTATACCTCCTTCCTTGGCATTCAGGATCTTTAGCCTTCTGACTACTGAGTCTCAAGT
TTTGGGTAATTCTAGTGCTGCCTTAACTGAGAGACATTTCAAAGTAGATGCCCTACTTCGACATTTAAAGGCTCTGCTTCCATCTTCAAGCTCTTCCACAATTTGA
Protein sequenceShow/hide protein sequence
MEIVHIRGSVFKLSSSIFNDFLDHHLPHSSPLPSLTPEALTFELTGGTLNVWASNGQILVVSLSVNLLIHQNFGILLAFDAPGPAPKTLSVSYRFFQGSHTLDLAPSNQP
PHGHTSTKNVNIPTNGLLIPPSLAFRIFSLLTTESQVLGNSSAALTERHFKVDALLRHLKALLPSSSSSTI