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PI0011458 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011458
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVQ domain-containing protein
Genome locationchr04:5950139..5950480
RNA-Seq ExpressionPI0011458
SyntenyPI0011458
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]7.6e-4790.27Show/hide
Query:  MMMNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHS
        MMMN  A RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP    NQR+RRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV VVASSCSASGM+TDHS
Subjt:  MMMNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHS

Query:  GEEFVSACNCIPS
        GEEF SACNCIPS
Subjt:  GEEFVSACNCIPS

KAG2686797.1 hypothetical protein I3760_09G023900 [Carya illinoinensis]1.2e-1254.22Show/hide
Query:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCS
        + + QL+GPRP  LTV KSST I     K P+P ++    RSP+I+YL+SPK+IHVRPEEF   VQRLTG ++  TVVA++ S
Subjt:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCS

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3275.44Show/hide
Query:  MNSAAVRNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPL-PISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDH
        MNSAA RNQ   +LRGPRPPPLTVNKSST IFKKST   L PI N+RD   P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SSV VVA+S SA+GM+ DH
Subjt:  MNSAAVRNQ--SQLRGPRPPPLTVNKSSTNIFKKSTKNPL-PISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDH

Query:  SGEEFVSACNCIPS
         GE  VSACN IPS
Subjt:  SGEEFVSACNCIPS

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]1.6e-4185.22Show/hide
Query:  MMMNSAAVRNQSQLRGPRPPPLTVNK-SSTNIFKKSTK-NPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD
        MM+ SAA RN SQLRGPRPPPLTVNK SSTNI KKSTK NPLPISNQR RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSV VVASSCSA+GM+ D
Subjt:  MMMNSAAVRNQSQLRGPRPPPLTVNK-SSTNIFKKSTK-NPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD

Query:  HSGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  HSGEEFVSACNCIPS

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]8.4e-4690.09Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGE
        MN  A RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP    NQR+RRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV VVASSCSASGM+TDHSGE
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGE

Query:  EFVSACNCIPS
        EF SACNCIPS
Subjt:  EFVSACNCIPS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein7.9e-4285.22Show/hide
Query:  MMMNSAAVRNQSQLRGPRPPPLTVNK-SSTNIFKKSTK-NPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD
        MM+ SAA RN SQLRGPRPPPLTVNK SSTNI KKSTK NPLPISNQR RRSPIIIYLRSPK+IHVRPEEFKSFVQRLTGNRSSV VVASSCSA+GM+ D
Subjt:  MMMNSAAVRNQSQLRGPRPPPLTVNK-SSTNIFKKSTK-NPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD

Query:  HSGEEFVSACNCIPS
           EEFVS CNCIPS
Subjt:  HSGEEFVSACNCIPS

A0A1S3B975 protein MKS1-like4.1e-4690.09Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGE
        MN  A RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP    NQR+RRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV VVASSCSASGM+TDHSGE
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGE

Query:  EFVSACNCIPS
        EF SACNCIPS
Subjt:  EFVSACNCIPS

A0A2N9GB07 VQ domain-containing protein2.4e-1454.55Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASS----CSASGMVT
        M+S   +   QL+GPRP PLTVNKSST I     K PLP    R R SP+IIYL+SPK+IHVRPEEF   VQ+LTGN++   V A S    CS S   T
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASS----CSASGMVT

A0A5D3DP92 Protein MKS1-like3.7e-4790.27Show/hide
Query:  MMMNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHS
        MMMN  A RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNP    NQR+RRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV VVASSCSASGM+TDHS
Subjt:  MMMNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHS

Query:  GEEFVSACNCIPS
        GEEF SACNCIPS
Subjt:  GEEFVSACNCIPS

A0A5J4ZMH6 VQ domain-containing protein7.7e-1350.55Show/hide
Query:  QLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGEE
        QL GPRP PL VNKSS+ I K       P+ NQ   R P+++YL+SPKIIHV P EF   VQRLTGN+ S +V++ S  + G+  D  G E
Subjt:  QLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGEE

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B6.7e-0634.55Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC
        M++ + R++  + GP+P PL V   S  I KK   +  +P P          S  R    P+ IY  +P+IIH  P  F + VQRLTG  S+ T  +SS 
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC

Query:  SASGMVTDHS
        S++    D S
Subjt:  SASGMVTDHS

Q8LGD5 Protein MKS18.5e-0946.91Show/hide
Query:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDR------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV
        + Q Q+ GPRP PL+V+K S  I KK  K+P P  N RD+      R P++IY  SPK++H    EF + VQRLTG  S V
Subjt:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDR------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV

Q9CA36 VQ motif-containing protein 8, chloroplastic2.6e-0539.08Show/hide
Query:  SQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD
        +++ G RP  L +   S  I K S+    P      R SP+IIY  SPK+IH R E+F + VQRLTG    +    +S S+S +VT+
Subjt:  SQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD

Q9LS54 VQ motif-containing protein 203.9e-0645.16Show/hide
Query:  PRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I  K   +P   S+    R P+IIY  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding4.8e-0734.55Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC
        M++ + R++  + GP+P PL V   S  I KK   +  +P P          S  R    P+ IY  +P+IIH  P  F + VQRLTG  S+ T  +SS 
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC

Query:  SASGMVTDHS
        S++    D S
Subjt:  SASGMVTDHS

AT1G21326.1 VQ motif-containing protein1.3e-0737.27Show/hide
Query:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC
        M++ + R++  L GPRP PL V   S  I KK   +  +P P          S  R    P+IIY  SP+IIH  P  F + VQRLTG  S+ T  +S  
Subjt:  MNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKK---STKNPLP---------ISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSC

Query:  SASGMVTDHS
        S++    D S
Subjt:  SASGMVTDHS

AT1G68450.1 VQ motif-containing protein1.8e-0639.08Show/hide
Query:  SQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD
        +++ G RP  L +   S  I K S+    P      R SP+IIY  SPK+IH R E+F + VQRLTG    +    +S S+S +VT+
Subjt:  SQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTD

AT3G18360.1 VQ motif-containing protein2.8e-0745.16Show/hide
Query:  PRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I  K   +P   S+    R P+IIY  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18690.1 MAP kinase substrate 16.0e-1046.91Show/hide
Query:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDR------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV
        + Q Q+ GPRP PL+V+K S  I KK  K+P P  N RD+      R P++IY  SPK++H    EF + VQRLTG  S V
Subjt:  RNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDR------RSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAATTCCGCCGCCGTAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCATTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAA
GAATCCTCTTCCGATTTCGAATCAACGCGATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTC
AACGTCTCACCGGAAATCGATCCTCTGTAACCGTCGTCGCGTCGTCGTGTTCTGCTAGTGGAATGGTTACGGATCATTCTGGTGAGGAATTTGTATCCGCATGCAATTGC
ATTCCGTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGATGAATTCCGCCGCCGTAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCATTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAA
GAATCCTCTTCCGATTTCGAATCAACGCGATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTC
AACGTCTCACCGGAAATCGATCCTCTGTAACCGTCGTCGCGTCGTCGTGTTCTGCTAGTGGAATGGTTACGGATCATTCTGGTGAGGAATTTGTATCCGCATGCAATTGC
ATTCCGTCGTAG
Protein sequenceShow/hide protein sequence
MMMNSAAVRNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPLPISNQRDRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVTVVASSCSASGMVTDHSGEEFVSACNC
IPS