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PI0011459 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011459
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:4599933..4600571
RNA-Seq ExpressionPI0011459
SyntenyPI0011459
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056273.1 retrotransposon protein [Cucumis melo var. makuwa]9.8e-1753.06Show/hide
Query:  KKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYE-------------ITGEMGGGIVDRTPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
        KK ++RL+E+++E +SY+K+EE GTSDGS MKLKGK+ E +              T     G     PLP +AESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  KKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYE-------------ITGEMGGGIVDRTPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

KAA0062473.1 uncharacterized protein E6C27_scaffold130G00620 [Cucumis melo var. makuwa]6.1e-1940Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDRT--------------------------------
        K+EVL LKE+MLEMKK++DR +++L+E  SY+K+EE GTSDGS MK+KGK+ E ++T E+   +VDR+                                
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDRT--------------------------------

Query:  -----------------------------PLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                                     PLP +AESVL+DAF+TGLEP LQAEV+SRHP
Subjt:  -----------------------------PLPDIAESVLKDAFVTGLEPALQAEVVSRHP

KAA0063363.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-2042.48Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------
        ++EVL LKE+MLEMKK++DRL+++L+E  SY+K+EE GTS+ S MK+KGK+ E +ITGE+   +VDR                                 
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------

Query:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                              PLP +AESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

KAA0065995.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]8.0e-1941.18Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------
        ++EVL LKE+MLEMKK++DRL+++L+E  SY+ +EE GTSD S MK+KGK+ E +ITGE+   +V+R                                 
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------

Query:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                              PLP + ESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

TYK28905.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.4e-1743.97Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELG-TSDGSTMKLKGKLNEYEITGEMGGGIVDR--------------------------------
        ++++L +KE++LEMKK ++RL+++ KE  SY+K+EE G TS+GS MKLKGK++E E   E  G I DR                                
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELG-TSDGSTMKLKGKLNEYEITGEMGGGIVDR--------------------------------

Query:  ---------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                 TPLP +AESVL DAFVTGLEP+LQAEV+SRHP
Subjt:  ---------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

TrEMBL top hitse value%identityAlignment
A0A5A7VJU2 Ty3/gypsy retrotransposon protein3.9e-1941.18Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------
        ++EVL LKE+MLEMKK++DRL+++L+E  SY+ +EE GTSD S MK+KGK+ E +ITGE+   +V+R                                 
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------

Query:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                              PLP + ESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

A0A5D3C4D8 Retrotransposon protein4.8e-1753.06Show/hide
Query:  KKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYE-------------ITGEMGGGIVDRTPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
        KK ++RL+E+++E +SY+K+EE GTSDGS MKLKGK+ E +              T     G     PLP +AESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  KKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYE-------------ITGEMGGGIVDRTPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

A0A5D3DVI3 Uncharacterized protein3.0e-1940Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDRT--------------------------------
        K+EVL LKE+MLEMKK++DR +++L+E  SY+K+EE GTSDGS MK+KGK+ E ++T E+   +VDR+                                
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDRT--------------------------------

Query:  -----------------------------PLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                                     PLP +AESVL+DAF+TGLEP LQAEV+SRHP
Subjt:  -----------------------------PLPDIAESVLKDAFVTGLEPALQAEVVSRHP

A0A5D3DXK6 Retrotransposon protein2.7e-2042.48Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------
        ++EVL LKE+MLEMKK++DRL+++L+E  SY+K+EE GTS+ S MK+KGK+ E +ITGE+   +VDR                                 
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDR---------------------------------

Query:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                              PLP +AESVL+DAF+TGLEPALQAEV+SRHP
Subjt:  ---------------------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

A0A5D3DZZ7 Ty3/gypsy retrotransposon protein1.6e-1743.97Show/hide
Query:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELG-TSDGSTMKLKGKLNEYEITGEMGGGIVDR--------------------------------
        ++++L +KE++LEMKK ++RL+++ KE  SY+K+EE G TS+GS MKLKGK++E E   E  G I DR                                
Subjt:  KEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELG-TSDGSTMKLKGKLNEYEITGEMGGGIVDR--------------------------------

Query:  ---------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP
                 TPLP +AESVL DAFVTGLEP+LQAEV+SRHP
Subjt:  ---------TPLPDIAESVLKDAFVTGLEPALQAEVVSRHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGAGAGTACAAAGAGGAAGTCCTGGGTTTGAAGGAAATTATGTTGGAAATGAAGAAGGCTTTAGATCGGTTGTCTGAAGATCTGAAGGAGGGAAGTTCTTACAG
AAAAAGGGAGGAATTGGGAACATCCGATGGTTCCACCATGAAGCTGAAGGGGAAGTTGAACGAATATGAGATTACTGGGGAGATGGGTGGAGGGATAGTGGATAGAACCC
CACTGCCAGACATAGCAGAAAGTGTGCTTAAAGATGCCTTTGTAACTGGGTTGGAACCGGCTCTTCAAGCCGAAGTGGTGAGCCGTCACCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGAGAGTACAAAGAGGAAGTCCTGGGTTTGAAGGAAATTATGTTGGAAATGAAGAAGGCTTTAGATCGGTTGTCTGAAGATCTGAAGGAGGGAAGTTCTTACAG
AAAAAGGGAGGAATTGGGAACATCCGATGGTTCCACCATGAAGCTGAAGGGGAAGTTGAACGAATATGAGATTACTGGGGAGATGGGTGGAGGGATAGTGGATAGAACCC
CACTGCCAGACATAGCAGAAAGTGTGCTTAAAGATGCCTTTGTAACTGGGTTGGAACCGGCTCTTCAAGCCGAAGTGGTGAGCCGTCACCCTTAA
Protein sequenceShow/hide protein sequence
MTREYKEEVLGLKEIMLEMKKALDRLSEDLKEGSSYRKREELGTSDGSTMKLKGKLNEYEITGEMGGGIVDRTPLPDIAESVLKDAFVTGLEPALQAEVVSRHP