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PI0011468 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011468
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:15536337..15536690
RNA-Seq ExpressionPI0011468
SyntenyPI0011468
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-3664.04Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVKV
        I+AE+ELF+NWV+V
Subjt:  IIAERELFNNWVKV

KAA0053616.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-3664.04Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVKV
        I+AE+ELF+NWV+V
Subjt:  IIAERELFNNWVKV

KAA0058870.1 retrotransposon protein [Cucumis melo var. makuwa]4.8e-3665.49Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WTKEEE  LVE L++L+S GGWKLDNGTFR GYLAQL  M+AEK+RGC ++ +  IDCRIK  K+TFQAI EM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-3666.37Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WTKEEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDEVKC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-3664.6Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A++H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

TrEMBL top hitse value%identityAlignment
A0A5A7T3X9 Retrotransposon protein3.0e-3664.04Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVKV
        I+AE+ELF+NWV+V
Subjt:  IIAERELFNNWVKV

A0A5A7UHB1 Retrotransposon protein3.0e-3664.04Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVKV
        I+AE+ELF+NWV+V
Subjt:  IIAERELFNNWVKV

A0A5A7VES2 Retrotransposon protein3.9e-3664.6Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A++H+WT+EEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

A0A5A7VKT2 Retrotransposon protein6.1e-3766.37Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WTKEEE  LVE L++LVS GGWK DNGTFR GYLAQL +M+AEK+ GC ++ +  IDCRIK  K+TFQAIAEM   + SGFGWNDEVKC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

A0A5D3DJA6 Retrotransposon protein2.3e-3665.49Show/hide
Query:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC
        M++S+ A +H+WTKEEE  LVE L++L+S GGWKLDNGTFR GYLAQL  M+AEK+RGC ++ +  IDCRIK  K+TFQAI EM   + SGFGWNDE KC
Subjt:  MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKN-KKTFQAIAEMCRSSYSGFGWNDEVKC

Query:  IIAERELFNNWVK
        IIAE+ELF+NWV+
Subjt:  IIAERELFNNWVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCCTCCTGGGCCGCCAAACACATTTGGACCAAGGAGGAAGAGTCGTACCTGGTCGAGGCCTTGGTGGACTTGGTATCCGCTGGCGGCTGGAAGTTAGACAA
CGGTACCTTCCGACTTGGGTACCTGGCTCAGCTACAGAAAATGCTGGCGGAGAAGATGCGAGGATGTAATATCCAAGGTTCGCCGACAATAGACTGTCGGATAAAAAACA
AGAAAACATTTCAAGCCATTGCAGAAATGTGCAGGTCGTCATATAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCAACAATTGG
GTTAAGGTAAGTTATTCATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCCTCCTGGGCCGCCAAACACATTTGGACCAAGGAGGAAGAGTCGTACCTGGTCGAGGCCTTGGTGGACTTGGTATCCGCTGGCGGCTGGAAGTTAGACAA
CGGTACCTTCCGACTTGGGTACCTGGCTCAGCTACAGAAAATGCTGGCGGAGAAGATGCGAGGATGTAATATCCAAGGTTCGCCGACAATAGACTGTCGGATAAAAAACA
AGAAAACATTTCAAGCCATTGCAGAAATGTGCAGGTCGTCATATAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCAACAATTGG
GTTAAGGTAAGTTATTCATTATGA
Protein sequenceShow/hide protein sequence
MASSSWAAKHIWTKEEESYLVEALVDLVSAGGWKLDNGTFRLGYLAQLQKMLAEKMRGCNIQGSPTIDCRIKNKKTFQAIAEMCRSSYSGFGWNDEVKCIIAERELFNNW
VKVSYSL