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PI0011479 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011479
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionArabinogalactan peptide 23-like
Genome locationchr08:9828791..9828979
RNA-Seq ExpressionPI0011479
SyntenyPI0011479
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035760.1 arabinogalactan peptide 23-like [Cucumis melo var. makuwa]5.9e-1790.32Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        MEMKNFACAAF+AV ASLSMVLASDEAA PAP PSSG SATLPVVGTLLGASAASLIAY LQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

KAE8649766.1 hypothetical protein Csa_011936, partial [Cucumis sativus]1.6e-1489.66Show/hide
Query:  NFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        NFACAAF+ VAASLSMVLASDEAA PAP PSS ASATLPVVGTLLGASAASLIAY LQ
Subjt:  NFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

KCW90250.1 hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]5.0e-0864.52Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        M+MK  +CA  VA AAS+S VLASD++  PAP PSSGASA LPV G+L+GAS  S  AYYLQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

PNS97963.1 hypothetical protein POPTR_016G052000 [Populus trichocarpa]8.5e-0862.9Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        M +K  +CA  V VAAS+S  LA+DE + PAPSP+SGASATLPVVG+L+GAS  S  AYY Q
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

PNT29922.1 hypothetical protein POPTR_006G056200 [Populus trichocarpa]5.9e-0966.13Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        ME+K  +CA  V VAAS+S  LA+DE + PAPSP+SGASATLPVVG+L+GAS  S  AYYLQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

TrEMBL top hitse value%identityAlignment
A0A059DIY4 Uncharacterized protein (Fragment)2.4e-0864.52Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        M+MK  +CA  VA AAS+S VLASD++  PAP PSSGASA LPV G+L+GAS  S  AYYLQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

A0A2K1XB13 Uncharacterized protein4.1e-0862.9Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        M +K  +CA  V VAAS+S  LA+DE + PAPSP+SGASATLPVVG+L+GAS  S  AYY Q
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

A0A2K1ZXB0 Uncharacterized protein2.8e-0966.13Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        ME+K  +CA  V VAAS+S  LA+DE + PAPSP+SGASATLPVVG+L+GAS  S  AYYLQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

A0A3N7FUN0 Uncharacterized protein1.2e-0769.35Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        MEMK  ACA   A AAS+S V+A DE A PAPSP+SGAS +LPVVG+L+GAS ASLIA YLQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

A0A5D3E271 Arabinogalactan peptide 23-like2.8e-1790.32Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ
        MEMKNFACAAF+AV ASLSMVLASDEAA PAP PSSG SATLPVVGTLLGASAASLIAY LQ
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ

SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.5e-0754.1Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYL
        MEMK  AC    A AAS++ V+A++E   PAP P+S ASA LP +G+L+GAS  SL +YYL
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYL

Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.1e-0553.23Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSP-SSGASATLPVVGTLLGASAASLIAYYL
        MEMK  AC   V  AAS++ V+A+ E   PAP P +SGAS  +P +G+L+GAS  SL AYYL
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSP-SSGASATLPVVGTLLGASAASLIAYYL

AT3G57690.1 arabinogalactan protein 231.1e-0854.1Show/hide
Query:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYL
        MEMK  AC    A AAS++ V+A++E   PAP P+S ASA LP +G+L+GAS  SL +YYL
Subjt:  MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAACTTTGCCTGCGCCGCCTTCGTCGCTGTTGCTGCCTCCCTGAGTATGGTTTTGGCCTCTGATGAAGCAGCAGGCCCAGCACCCAGCCCATCCAGCGG
TGCTTCCGCTACTTTGCCCGTCGTCGGGACGTTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTACCTTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAACTTTGCCTGCGCCGCCTTCGTCGCTGTTGCTGCCTCCCTGAGTATGGTTTTGGCCTCTGATGAAGCAGCAGGCCCAGCACCCAGCCCATCCAGCGG
TGCTTCCGCTACTTTGCCCGTCGTCGGGACGTTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTACCTTCAGTAA
Protein sequenceShow/hide protein sequence
MEMKNFACAAFVAVAASLSMVLASDEAAGPAPSPSSGASATLPVVGTLLGASAASLIAYYLQ