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PI0011488 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011488
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:14207719..14207934
RNA-Seq ExpressionPI0011488
SyntenyPI0011488
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054520.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]8.2e-1571.19Show/hide
Query:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR
        MG C ETFVDVGSNV   YE F ++DGN+M+IPMMYSQG+DM P DIMGT+PS  SEGR
Subjt:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1466.67Show/hide
Query:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        ETFV+VGSNV+  YE F  +DGND+EIP MYSQG+DMS +DIMGTRP + S+GR  S+ SKRKW G
Subjt:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]5.5e-1975Show/hide
Query:  CTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        C ETF DVGSN  E YE F  DDGNDMEIPMMYSQG+DM  +DIMGTRP R +EGRTGS+GSKRK GG
Subjt:  CTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

TYJ98275.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]8.2e-1571.19Show/hide
Query:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR
        MG C ETFVDVGSNV   YE F ++DGN+M+IPMMYSQG+DM P DIMGT+PS  SEGR
Subjt:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR

TYK11084.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1466.67Show/hide
Query:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        ETFV+VGSNV+  YE F  +DGND+EIP MYSQG+DMS +DIMGTRP + S+GR  S+ SKRKW G
Subjt:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

TrEMBL top hitse value%identityAlignment
A0A5A7UGY0 RING-H2 finger protein ATL664.0e-1571.19Show/hide
Query:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR
        MG C ETFVDVGSNV   YE F ++DGN+M+IPMMYSQG+DM P DIMGT+PS  SEGR
Subjt:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR

A0A5A7UNI7 Retrotransposon protein6.8e-1566.67Show/hide
Query:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        ETFV+VGSNV+  YE F  +DGND+EIP MYSQG+DMS +DIMGTRP + S+GR  S+ SKRKW G
Subjt:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

A0A5A7V469 Retrotransposon protein2.7e-1975Show/hide
Query:  CTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        C ETF DVGSN  E YE F  DDGNDMEIPMMYSQG+DM  +DIMGTRP R +EGRTGS+GSKRK GG
Subjt:  CTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

A0A5D3BIM9 RING-H2 finger protein ATL664.0e-1571.19Show/hide
Query:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR
        MG C ETFVDVGSNV   YE F ++DGN+M+IPMMYSQG+DM P DIMGT+PS  SEGR
Subjt:  MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGR

A0A5D3CIS8 Retrotransposon protein6.8e-1566.67Show/hide
Query:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG
        ETFV+VGSNV+  YE F  +DGND+EIP MYSQG+DMS +DIMGTRP + S+GR  S+ SKRKW G
Subjt:  ETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGTGCACGGAGACATTCGTCGATGTGGGGTCGAATGTGCTTGAATGGTATGAGAGATTTCCCGATGACGATGGAAACGATATGGAGATCCCTATGATGTATAG
TCAGGGAGTAGACATGTCGCCTAACGACATCATGGGCACACGACCCAGTCGCTTGAGTGAGGGTAGGACTGGTTCAAACGGATCGAAGAGGAAATGGGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGTGCACGGAGACATTCGTCGATGTGGGGTCGAATGTGCTTGAATGGTATGAGAGATTTCCCGATGACGATGGAAACGATATGGAGATCCCTATGATGTATAG
TCAGGGAGTAGACATGTCGCCTAACGACATCATGGGCACACGACCCAGTCGCTTGAGTGAGGGTAGGACTGGTTCAAACGGATCGAAGAGGAAATGGGGAGGCTAG
Protein sequenceShow/hide protein sequence
MGVCTETFVDVGSNVLEWYERFPDDDGNDMEIPMMYSQGVDMSPNDIMGTRPSRLSEGRTGSNGSKRKWGG