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PI0011509 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011509
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr08:10350326..10351459
RNA-Seq ExpressionPI0011509
SyntenyPI0011509
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]3.6e-2047.73Show/hide
Query:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW
        +A NNEEWD+D F + RGGR +++EG+D+NV+V  QGQMT MNNLL+ M   QVNA  SS Q+V Q+D++G M    PH  D   +  + V         
Subjt:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW

Query:  DNDPFSNTYNPSWRNRPNF--GWGGTGQQNQW
         +DP+SNTYNP WRN PNF    G T  +  W
Subjt:  DNDPFSNTYNPSWRNRPNF--GWGGTGQQNQW

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]4.3e-1336.27Show/hide
Query:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW
        + +N++E  +DD   +   R R+D GMD+NV+VALQGQ+T M  LL+SMA+SQV+A  + VQAV Q+D++  +GC  PH TD   + N  + +  +    
Subjt:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW

Query:  DNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQHGGQGDHRGEASGSHTRYHNNRPQYFQHQ-QQRTITTPSTSSSMETSSASICRRMMSFCKAK
         + P+SNTYN                         G++RGEA   H + H +RP Y   Q QQ T  TPS+ SSM        +R  +F +++
Subjt:  DNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQHGGQGDHRGEASGSHTRYHNNRPQYFQHQ-QQRTITTPSTSSSMETSSASICRRMMSFCKAK

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.4e-1147.73Show/hide
Query:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD
        MASN++EW ++ FG+R      +G R R ++G+D +++VALQGQ+  M N+L+SMA+ QVN   SSVQ V Q++++G +GC  PHNT+
Subjt:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]2.3e-1446.3Show/hide
Query:  VVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQWDNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQ
        +VALQGQ+T M+ LL+SM ++QVN   SSV  V  + ++  +GC G +NTD      K +          NDP+SNTYN  WRN  NF WGGTGQ NQ +
Subjt:  VVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQWDNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQ

Query:  HGGQGDHR
         G Q  +R
Subjt:  HGGQGDHR

KAA0066665.1 hypothetical protein E6C27_scaffold979G00980 [Cucumis melo var. makuwa]2.0e-1047.73Show/hide
Query:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD
        MASN+ EW +  FG+R      RG R R ++ M++N +VALQGQ+  MN LL+SM +SQVN     +QA  Q++++G +GC+ PHNTD
Subjt:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein1.1e-1446.3Show/hide
Query:  VVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQWDNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQ
        +VALQGQ+T M+ LL+SM ++QVN   SSV  V  + ++  +GC G +NTD      K +          NDP+SNTYN  WRN  NF WGGTGQ NQ +
Subjt:  VVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQWDNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQ

Query:  HGGQGDHR
         G Q  +R
Subjt:  HGGQGDHR

A0A5A7VLN9 Uncharacterized protein9.7e-1147.73Show/hide
Query:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD
        MASN+ EW +  FG+R      RG R R ++ M++N +VALQGQ+  MN LL+SM +SQVN     +QA  Q++++G +GC+ PHNTD
Subjt:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD

A0A5D3CC26 Uncharacterized protein1.1e-1147.73Show/hide
Query:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD
        MASN++EW ++ FG+R      +G R R ++G+D +++VALQGQ+  M N+L+SMA+ QVN   SSVQ V Q++++G +GC  PHNT+
Subjt:  MASNNEEWDEDDFGNR------RGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTD

A0A5D3CSC7 Uncharacterized protein1.8e-2047.73Show/hide
Query:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW
        +A NNEEWD+D F + RGGR +++EG+D+NV+V  QGQMT MNNLL+ M   QVNA  SS Q+V Q+D++G M    PH  D   +  + V         
Subjt:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW

Query:  DNDPFSNTYNPSWRNRPNF--GWGGTGQQNQW
         +DP+SNTYNP WRN PNF    G T  +  W
Subjt:  DNDPFSNTYNPSWRNRPNF--GWGGTGQQNQW

A0A5D3D2S0 Uncharacterized protein2.1e-1336.27Show/hide
Query:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW
        + +N++E  +DD   +   R R+D GMD+NV+VALQGQ+T M  LL+SMA+SQV+A  + VQAV Q+D++  +GC  PH TD   + N  + +  +    
Subjt:  MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQW

Query:  DNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQHGGQGDHRGEASGSHTRYHNNRPQYFQHQ-QQRTITTPSTSSSMETSSASICRRMMSFCKAK
         + P+SNTYN                         G++RGEA   H + H +RP Y   Q QQ T  TPS+ SSM        +R  +F +++
Subjt:  DNDPFSNTYNPSWRNRPNFGWGGTGQQNQWQHGGQGDHRGEASGSHTRYHNNRPQYFQHQ-QQRTITTPSTSSSMETSSASICRRMMSFCKAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCAATAACGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAAGAAGAAGCGATGAAGGAATGGACAAGAACGTCGTGGTGGCATTGCAAGG
ACAAATGACTGTGATGAATAACCTTCTGAAATCTATGGCAATATCGCAGGTTAATGCTTTCGAAAGCTCTGTACAGGCGGTGAATCAAATTGATGACTTGGGATATATGG
GATGCGATGGTCCTCATAATACTGACAATAAAGATGTACCAAACAAGGGCGTGGAGAGCACGGGGCAACGTGAACAATGGGATAACGACCCTTTCTCCAACACCTACAAT
CCTAGTTGGAGAAACCGTCCTAACTTCGGATGGGGAGGAACGGGTCAACAAAATCAATGGCAACATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACAC
GAGGTACCACAACAACAGACCACAATATTTCCAACATCAACAGCAACGCACCATCACTACTCCATCCACTTCTTCATCTATGGAAACCTCATCCGCGAGTATATGCAGAA
GAATGATGTCCTTCTGCAAAGCCAAACTTCATCAATTCGCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCAATAACGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAAGAAGAAGCGATGAAGGAATGGACAAGAACGTCGTGGTGGCATTGCAAGG
ACAAATGACTGTGATGAATAACCTTCTGAAATCTATGGCAATATCGCAGGTTAATGCTTTCGAAAGCTCTGTACAGGCGGTGAATCAAATTGATGACTTGGGATATATGG
GATGCGATGGTCCTCATAATACTGACAATAAAGATGTACCAAACAAGGGCGTGGAGAGCACGGGGCAACGTGAACAATGGGATAACGACCCTTTCTCCAACACCTACAAT
CCTAGTTGGAGAAACCGTCCTAACTTCGGATGGGGAGGAACGGGTCAACAAAATCAATGGCAACATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACAC
GAGGTACCACAACAACAGACCACAATATTTCCAACATCAACAGCAACGCACCATCACTACTCCATCCACTTCTTCATCTATGGAAACCTCATCCGCGAGTATATGCAGAA
GAATGATGTCCTTCTGCAAAGCCAAACTTCATCAATTCGCAATCTGA
Protein sequenceShow/hide protein sequence
MASNNEEWDEDDFGNRRGGRRRSDEGMDKNVVVALQGQMTVMNNLLKSMAISQVNAFESSVQAVNQIDDLGYMGCDGPHNTDNKDVPNKGVESTGQREQWDNDPFSNTYN
PSWRNRPNFGWGGTGQQNQWQHGGQGDHRGEASGSHTRYHNNRPQYFQHQQQRTITTPSTSSSMETSSASICRRMMSFCKAKLHQFAI