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PI0011553 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011553
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr04:23785135..23785902
RNA-Seq ExpressionPI0011553
SyntenyPI0011553
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64330.1 hypothetical protein VITISV_014666 [Vitis vinifera]5.7e-1829.3Show/hide
Query:  MLSSIASQVFKLE----------EIINPTI----LDESPTLFQPLE---KVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFRE-------DFD
        ML +I SQ+ ++E          +I+ P      LD++  +F+P E   K+K  + +Q LL+ + +++  L   +  +  N + +N   E       +  
Subjt:  MLSSIASQVFKLE----------EIINPTI----LDESPTLFQPLE---KVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFRE-------DFD

Query:  NFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGF
          F  ++ QINK+   KF  +    N+H RP+ P    E+R +  + ++++G+ IY WNIDG  + Q+ +IL  M+  S AY+S    +      LI GF
Subjt:  NFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGF

Query:  SGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQ
        +G LK WWD+ALT E++         I+K+I    +P           + + TL+YAI +HF LG+    + Q
Subjt:  SGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQ

ESQ34144.1 hypothetical protein EUTSA_v10009827mg, partial [Eutrema salsugineum]3.0e-1932.03Show/hide
Query:  SPTLFQPLEKVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLN
        S  +F+P+ + ++K  K ++L+ I NRL+ L    SIN ++E D    +       I  E  I ++N  K    R    Y+SR + P    E+  +Y+ N
Subjt:  SPTLFQPLEKVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLN

Query:  TEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGA-SNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEED
          ++G  IY WNIDG  E++I ++L  M   + A++++   ++ +A  LL+ GFSGSLK WWD+AL   Q+  I +H   ++K    + D      +E +
Subjt:  TEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGA-SNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEED

Query:  REDAVETLLYAINRHFGLGNDTDIENQRKII
        + +A+E L++ I  HF +GN T+    ++II
Subjt:  REDAVETLLYAINRHFGLGNDTDIENQRKII

KAA0056258.1 hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa]1.3e-3072.45Show/hide
Query:  AYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKIIK
        AYESNG SN +AA LLINGFSGSLKLWWDHAL+ E+KE IK  KT++++ IK E   STT EVEE+ E+ VETLLYAIN HFGLG+DTD+ENQRKIIK
Subjt:  AYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKIIK

KAF5803680.1 putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]1.2e-2333.94Show/hide
Query:  LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEE-KQINKLN--FSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWN
        +L++I+++++ L    +INV++++++    E F++F I +  K+I + N  FSK   +  + +  NY+ RP+ P   L+  +R+TL   +++G S+Y WN
Subjt:  LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEE-KQINKLN--FSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWN

Query:  IDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAIN
        I+G  E QI ++L  M+  + AY++NG + A    ++++GF+G LK WWD  LT E+K +I++ K   K  IK+EN+    ++V  +  D + TL++AI 
Subjt:  IDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAIN

Query:  RHFGLGNDTDIENQRKII
        +HF +GN TD + +  +I
Subjt:  RHFGLGNDTDIENQRKII

KAG5605965.1 hypothetical protein H5410_027457 [Solanum commersonii]2.3e-1935.96Show/hide
Query:  LLEEINNRLNNL-------KGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWN
        ++E+IN RLNN        K  + + +L EE   + +E        +   + KL  S+F N +   NYH++PSFP    E+   +   +   G SI  WN
Subjt:  LLEEINNRLNNL-------KGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWN

Query:  IDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAIN
        IDG  E Q+++ L+ M     AY+  G ++ DAA ++I GF+G LK WWD+  T E K +I  + T  +  +K+E +  TT  V   REDA  TLLY I 
Subjt:  IDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAIN

Query:  RHF
        +HF
Subjt:  RHF

TrEMBL top hitse value%identityAlignment
A0A251TAC4 Uncharacterized protein5.8e-2431.52Show/hide
Query:  LSSIASQVFKLEEIINPTILDESPT-------------LFQPLE-KVKIKSQKQK-LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQI
        L++I  Q+ ++E   N   LD+  T             +F+P    + I+  KQ+ +L++I+++++ L    +INV++++++    E F++F I  E  I
Subjt:  LSSIASQVFKLEEIINPTILDESPT-------------LFQPLE-KVKIKSQKQK-LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQI

Query:  NKL-----NFSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFS
        NK+      FSK   +  + +  N + RP+ P   L+  +R+TL   +++G S+Y WNI+G  E QI ++L  M+  + AY++NG + A    ++++GF+
Subjt:  NKL-----NFSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFS

Query:  GSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKII
        G LK WWD  LT E+K +I++ K   K  IK+EN+    ++V  +  D + TL++AI +HF +GN TD + +  +I
Subjt:  GSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKII

A0A251VET5 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein5.2e-2531.52Show/hide
Query:  LSSIASQVFKLEEIINPTILDESPT-------------LFQPLE-KVKIKSQKQK-LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQI
        L++I  Q+ ++E   N   LD+  T             +F+P    + I+  KQ+ +L++I+++++ L    +INV++++++    E F++F I  E  I
Subjt:  LSSIASQVFKLEEIINPTILDESPT-------------LFQPLE-KVKIKSQKQK-LLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQI

Query:  NKL-----NFSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFS
        NK+      FSK   +  + +  NY+ RP+ P   L+  +R+TL   +++G S+Y WNI+G  E QI ++L  M+  + AY++NG + A    ++++GF+
Subjt:  NKL-----NFSK---FINKRDQINYHSRPSFPGEGLEQRQRYTL-NTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFS

Query:  GSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKII
        G LK WWD  LT E+K +I++ K   K  IK+EN+    +++  +  D + TL++AI +HF +GN TD + +  +I
Subjt:  GSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKII

A0A5A7UMD8 Uncharacterized protein6.4e-3172.45Show/hide
Query:  AYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKIIK
        AYESNG SN +AA LLINGFSGSLKLWWDHAL+ E+KE IK  KT++++ IK E   STT EVEE+ E+ VETLLYAIN HFGLG+DTD+ENQRKIIK
Subjt:  AYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQRKIIK

A5C8I5 Uncharacterized protein2.8e-1829.3Show/hide
Query:  MLSSIASQVFKLE----------EIINPTI----LDESPTLFQPLE---KVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFRE-------DFD
        ML +I SQ+ ++E          +I+ P      LD++  +F+P E   K+K  + +Q LL+ + +++  L   +  +  N + +N   E       +  
Subjt:  MLSSIASQVFKLE----------EIINPTI----LDESPTLFQPLE---KVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFRE-------DFD

Query:  NFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGF
          F  ++ QINK+   KF  +    N+H RP+ P    E+R +  + ++++G+ IY WNIDG  + Q+ +IL  M+  S AY+S    +      LI GF
Subjt:  NFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLNTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGF

Query:  SGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQ
        +G LK WWD+ALT E++         I+K+I    +P           + + TL+YAI +HF LG+    + Q
Subjt:  SGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEEDREDAVETLLYAINRHFGLGNDTDIENQ

V4KS84 Uncharacterized protein (Fragment)1.5e-1932.03Show/hide
Query:  SPTLFQPLEKVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLN
        S  +F+P+ + ++K  K ++L+ I NRL+ L    SIN ++E D    +       I  E  I ++N  K    R    Y+SR + P    E+  +Y+ N
Subjt:  SPTLFQPLEKVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFPGEGLEQRQRYTLN

Query:  TEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGA-SNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEED
          ++G  IY WNIDG  E++I ++L  M   + A++++   ++ +A  LL+ GFSGSLK WWD+AL   Q+  I +H   ++K    + D      +E +
Subjt:  TEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGA-SNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVEED

Query:  REDAVETLLYAINRHFGLGNDTDIENQRKII
        + +A+E L++ I  HF +GN T+    ++II
Subjt:  REDAVETLLYAINRHFGLGNDTDIENQRKII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCTTCTATTGCCAGTCAAGTTTTCAAATTAGAAGAAATTATAAACCCTACAATCCTCGACGAATCACCTACACTTTTCCAACCTCTAGAAAAAGTTAAGATAAA
AAGTCAAAAACAAAAACTTTTAGAAGAAATTAATAATCGTTTAAATAACTTAAAAGGTGAAAGCTCAATAAATGTCCTCAATGAAGAAGACGTAAATCAATTCAGAGAAG
ATTTTGATAATTTCTTTATATATGAAGAAAAACAAATTAATAAATTAAACTTTAGCAAATTTATTAATAAAAGAGACCAAATCAATTACCATTCTCGACCTTCTTTTCCA
GGAGAAGGATTAGAGCAAAGACAAAGGTACACTTTAAATACCGAATTTAATGGAGAATCCATATATGTTTGGAATATAGATGGAACTCCAGAATTTCAAATCTTCGATAT
ACTGAATAATATGCTAACATGCTCTCTAGCTTACGAATCAAATGGCGCTTCTAATGCTGACGCTGCTAGACTTCTTATCAATGGATTTAGTGGAAGTCTAAAATTATGGT
GGGATCATGCTTTGACCCATGAACAAAAAGAGGTAATCAAAAGCCATAAAACTAGAATAAAAAAGACAATCAAATCTGAGAATGATCCTTCAACAACTCTAGAAGTTGAA
GAAGATAGAGAAGACGCTGTTGAAACTCTTCTCTACGCTATAAACAGACATTTCGGCCTTGGAAATGACACTGATATAGAAAATCAAAGAAAAATAATCAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCTTCTATTGCCAGTCAAGTTTTCAAATTAGAAGAAATTATAAACCCTACAATCCTCGACGAATCACCTACACTTTTCCAACCTCTAGAAAAAGTTAAGATAAA
AAGTCAAAAACAAAAACTTTTAGAAGAAATTAATAATCGTTTAAATAACTTAAAAGGTGAAAGCTCAATAAATGTCCTCAATGAAGAAGACGTAAATCAATTCAGAGAAG
ATTTTGATAATTTCTTTATATATGAAGAAAAACAAATTAATAAATTAAACTTTAGCAAATTTATTAATAAAAGAGACCAAATCAATTACCATTCTCGACCTTCTTTTCCA
GGAGAAGGATTAGAGCAAAGACAAAGGTACACTTTAAATACCGAATTTAATGGAGAATCCATATATGTTTGGAATATAGATGGAACTCCAGAATTTCAAATCTTCGATAT
ACTGAATAATATGCTAACATGCTCTCTAGCTTACGAATCAAATGGCGCTTCTAATGCTGACGCTGCTAGACTTCTTATCAATGGATTTAGTGGAAGTCTAAAATTATGGT
GGGATCATGCTTTGACCCATGAACAAAAAGAGGTAATCAAAAGCCATAAAACTAGAATAAAAAAGACAATCAAATCTGAGAATGATCCTTCAACAACTCTAGAAGTTGAA
GAAGATAGAGAAGACGCTGTTGAAACTCTTCTCTACGCTATAAACAGACATTTCGGCCTTGGAAATGACACTGATATAGAAAATCAAAGAAAAATAATCAAAATCTAA
Protein sequenceShow/hide protein sequence
MLSSIASQVFKLEEIINPTILDESPTLFQPLEKVKIKSQKQKLLEEINNRLNNLKGESSINVLNEEDVNQFREDFDNFFIYEEKQINKLNFSKFINKRDQINYHSRPSFP
GEGLEQRQRYTLNTEFNGESIYVWNIDGTPEFQIFDILNNMLTCSLAYESNGASNADAARLLINGFSGSLKLWWDHALTHEQKEVIKSHKTRIKKTIKSENDPSTTLEVE
EDREDAVETLLYAINRHFGLGNDTDIENQRKIIKI