; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011562 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011562
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:12142264..12144918
RNA-Seq ExpressionPI0011562
SyntenyPI0011562
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]3.6e-7633.03Show/hide
Query:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDLDNRWISITEVVDVEEMVVMFLHILANDVKNRVVQREFVRSS
        M   E+  I+  FI SQR+LL+ L++L ND KR+   PY+ RHRIR+LAYFR+IH        ++ TEVVDVEEMV MFLHILA+DVK+RV++REF+RS 
Subjt:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDLDNRWISITEVVDVEEMVVMFLHILANDVKNRVVQREFVRSS

Query:  ETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------------------------DPE
        ETISRHFN+VLL +IRLH+ELLKKPQPV N C D RWR FE         ++K                                            D  
Subjt:  ETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------------------------DPE

Query:  TFMDQRRRVH----PHG-----------MSGGAGLYRGM-------------------------------------------------------------
           D   R +    P G             G    YRG                                                              
Subjt:  TFMDQRRRVH----PHG-----------MSGGAGLYRGM-------------------------------------------------------------

Query:  ------------------------EIGQRHLQTR------------------------------------------------------------------
                                E+   H  T                                                                   
Subjt:  ------------------------EIGQRHLQTR------------------------------------------------------------------

Query:  -YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------
         YL  + RMM  K+P   I   +TI+ RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK++F++W                               
Subjt:  -YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------

Query:  RVETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQRE
        R E+FAD+GSN P  ++    +   + D P MYS G  MS +D++ETR  + SE R  SS SKRKR GH  ++ +++R+ +EY N+QL  IAEW   QR+
Subjt:  RVETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQRE

Query:  GESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN
          + TR  +V  L+ IPEL+ ++R R MRILMR+V DMKAFLEVP+ +K  YC++ILQ+N
Subjt:  GESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-8335.25Show/hide
Query:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMF
        M   E+  I+  FI SQR+LL+ L++L ND KR+   PY+ RHRIR+LAYFR+IH  DL        D R  +I             TEVVDVEEMV MF
Subjt:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMF

Query:  LHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------
        LHILA+DVKNRV+QREF+RS ETISRHFN+VLL +IRLHDELLKKPQPV N C D RWR FE         ++K                          
Subjt:  LHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------

Query:  ------------------DPETFMDQRRRVH----PHG-----------MSGGAGLYRGME-------------------IGQRHLQTR-----------
                          D     D   R +    P G             G    YRG                        +H   R           
Subjt:  ------------------DPETFMDQRRRVH----PHG-----------MSGGAGLYRGME-------------------IGQRHLQTR-----------

Query:  -------------------------------------------------------------------------------------YLTMILRMMTEKLPR
                                                                                             YL  + RMM  K+P 
Subjt:  -------------------------------------------------------------------------------------YLTMILRMMTEKLPR

Query:  CTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------RVETFADVGSNVPSSF
        C I   +TI+ RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK++F++W                               R E+FAD+GSN P  +
Subjt:  CTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------RVETFADVGSNVPSSF

Query:  EPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGI
        + F  +   + D   MYS G  MS +D++ETR  + SE R  SS SKRKR GH  ++ +++R+ +EY N+QL  IAEW   QR+  + TR  +V QL+ I
Subjt:  EPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGI

Query:  PELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN
        PEL+ ++R R MRILMR+V DMKAFLEVP+ +K  YC++ILQ+N
Subjt:  PELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN

KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-5752.61Show/hide
Query:  YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKRVETFADVGSNVPSSFEPFLDEDGYNMDIP
        YL  + RMMT K+  C I  +   + RIK +KR F A++EMRGPTCSGFGWNDE KCI+ EK++F +W+K   +FADVGSN P+ ++ FL +   +MD P
Subjt:  YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKRVETFADVGSNVPSSFEPFLDEDGYNMDIP

Query:  NMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRI
         MY+QG  MS +D++ TR     E R  SS SKRKR GH+ ++ ++IR+ +EY N+QL  IAEW   QR+  S TR  VV QL+ IPEL+ ++R R MRI
Subjt:  NMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRI

Query:  LMRSVIDMKAFLEVPNELKLDYCTVILQDN
        LMR+V DMKAFL+VPN +K  YC++ILQ+N
Subjt:  LMRSVIDMKAFLEVPNELKLDYCTVILQDN

KAA0045638.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-6135.68Show/hide
Query:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------
        MN++KRLP TP D RHRIR LAYFR+IHE DL        D R  +I             TE+VDVEEMV MFLH+LA+DVKN V+QREF          
Subjt:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------

Query:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL
                   T       +   ++ + D   + +        +  D R     + C     + E F+  D+ +R H     G A      +     +H 
Subjt:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL

Query:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------
         TR                   YL  ++RMM EKLP C ++ TT I+CRIKTLKRTFQAI+EM+GP CSG GWNDE KCII +K+LF+NWV+        
Subjt:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------

Query:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI
                                 ETFADVGSN P       D    N D   +YSQG  +S +D+  +RP ++SE RT SS SKRKR       VE I
Subjt:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI

Query:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD
           ++  N+QL+ IAEW       ++  R      L+ +PEL+ L+R    R L+  + D++ F+ +P + +  +C V+L+D
Subjt:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD

TYK02619.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-6035.48Show/hide
Query:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------
        MN++KRLP TP D RHRIR LAYF +IHE DL        D R  +I             TE+VDVEEMV MFLH+LA+DVKN V+QREF          
Subjt:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------

Query:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL
                   T       +   ++ + D   + +        +  D R     + C     + E F+  D+ +R H     G A      +     +H 
Subjt:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL

Query:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------
         TR                   YL  ++RMM EKLP C ++ TT I+CRIKTLKRTFQAI+EM+GP CSG GWNDE KCII +K+LF+NWV+        
Subjt:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------

Query:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI
                                 ETFADVGSN P       D    N D   +YSQG  +S +D+  +RP ++SE RT SS SKRKR       VE I
Subjt:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI

Query:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD
           ++  N+QL+ IAEW       ++  R      L+ +PEL+ L+R    R L+  + D++ F+ +P + +  +C V+L+D
Subjt:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein6.6e-8435.25Show/hide
Query:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMF
        M   E+  I+  FI SQR+LL+ L++L ND KR+   PY+ RHRIR+LAYFR+IH  DL        D R  +I             TEVVDVEEMV MF
Subjt:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMF

Query:  LHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------
        LHILA+DVKNRV+QREF+RS ETISRHFN+VLL +IRLHDELLKKPQPV N C D RWR FE         ++K                          
Subjt:  LHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------

Query:  ------------------DPETFMDQRRRVH----PHG-----------MSGGAGLYRGME-------------------IGQRHLQTR-----------
                          D     D   R +    P G             G    YRG                        +H   R           
Subjt:  ------------------DPETFMDQRRRVH----PHG-----------MSGGAGLYRGME-------------------IGQRHLQTR-----------

Query:  -------------------------------------------------------------------------------------YLTMILRMMTEKLPR
                                                                                             YL  + RMM  K+P 
Subjt:  -------------------------------------------------------------------------------------YLTMILRMMTEKLPR

Query:  CTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------RVETFADVGSNVPSSF
        C I   +TI+ RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK++F++W                               R E+FAD+GSN P  +
Subjt:  CTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------RVETFADVGSNVPSSF

Query:  EPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGI
        + F  +   + D   MYS G  MS +D++ETR  + SE R  SS SKRKR GH  ++ +++R+ +EY N+QL  IAEW   QR+  + TR  +V QL+ I
Subjt:  EPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGI

Query:  PELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN
        PEL+ ++R R MRILMR+V DMKAFLEVP+ +K  YC++ILQ+N
Subjt:  PELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN

A0A5A7TDD6 Retrotransposon protein6.2e-5852.61Show/hide
Query:  YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKRVETFADVGSNVPSSFEPFLDEDGYNMDIP
        YL  + RMMT K+  C I  +   + RIK +KR F A++EMRGPTCSGFGWNDE KCI+ EK++F +W+K   +FADVGSN P+ ++ FL +   +MD P
Subjt:  YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKRVETFADVGSNVPSSFEPFLDEDGYNMDIP

Query:  NMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRI
         MY+QG  MS +D++ TR     E R  SS SKRKR GH+ ++ ++IR+ +EY N+QL  IAEW   QR+  S TR  VV QL+ IPEL+ ++R R MRI
Subjt:  NMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRI

Query:  LMRSVIDMKAFLEVPNELKLDYCTVILQDN
        LMR+V DMKAFL+VPN +K  YC++ILQ+N
Subjt:  LMRSVIDMKAFLEVPNELKLDYCTVILQDN

A0A5A7TS15 Retrotransposon protein3.5e-6135.68Show/hide
Query:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------
        MN++KRLP TP D RHRIR LAYFR+IHE DL        D R  +I             TE+VDVEEMV MFLH+LA+DVKN V+QREF          
Subjt:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------

Query:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL
                   T       +   ++ + D   + +        +  D R     + C     + E F+  D+ +R H     G A      +     +H 
Subjt:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL

Query:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------
         TR                   YL  ++RMM EKLP C ++ TT I+CRIKTLKRTFQAI+EM+GP CSG GWNDE KCII +K+LF+NWV+        
Subjt:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------

Query:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI
                                 ETFADVGSN P       D    N D   +YSQG  +S +D+  +RP ++SE RT SS SKRKR       VE I
Subjt:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI

Query:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD
           ++  N+QL+ IAEW       ++  R      L+ +PEL+ L+R    R L+  + D++ F+ +P + +  +C V+L+D
Subjt:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD

A0A5D3BWV2 Retrotransposon protein2.3e-6035.48Show/hide
Query:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------
        MN++KRLP TP D RHRIR LAYF +IHE DL        D R  +I             TE+VDVEEMV MFLH+LA+DVKN V+QREF          
Subjt:  MNDHKRLPQTPYDIRHRIRRLAYFRLIHELDL--------DNRWISI-------------TEVVDVEEMVVMFLHILANDVKNRVVQREF----------

Query:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL
                   T       +   ++ + D   + +        +  D R     + C     + E F+  D+ +R H     G A      +     +H 
Subjt:  ------VRSSETISRHFNLVLLRIIRLHD---ELLKKPQPVTNTCIDPR-----WRCFEFVKDPETFM--DQRRRVHPHGMSGGAGLYRGME--IGQRHL

Query:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------
         TR                   YL  ++RMM EKLP C ++ TT I+CRIKTLKRTFQAI+EM+GP CSG GWNDE KCII +K+LF+NWV+        
Subjt:  QTR-------------------YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKR-------

Query:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI
                                 ETFADVGSN P       D    N D   +YSQG  +S +D+  +RP ++SE RT SS SKRKR       VE I
Subjt:  ------------------------VETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVI

Query:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD
           ++  N+QL+ IAEW       ++  R      L+ +PEL+ L+R    R L+  + D++ F+ +P + +  +C V+L+D
Subjt:  RSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQD

E5GCB5 Retrotransposon protein1.7e-7633.03Show/hide
Query:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDLDNRWISITEVVDVEEMVVMFLHILANDVKNRVVQREFVRSS
        M   E+  I+  FI SQR+LL+ L++L ND KR+   PY+ RHRIR+LAYFR+IH        ++ TEVVDVEEMV MFLHILA+DVK+RV++REF+RS 
Subjt:  MYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDLDNRWISITEVVDVEEMVVMFLHILANDVKNRVVQREFVRSS

Query:  ETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------------------------DPE
        ETISRHFN+VLL +IRLH+ELLKKPQPV N C D RWR FE         ++K                                            D  
Subjt:  ETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFE---------FVK--------------------------------------------DPE

Query:  TFMDQRRRVH----PHG-----------MSGGAGLYRGM-------------------------------------------------------------
           D   R +    P G             G    YRG                                                              
Subjt:  TFMDQRRRVH----PHG-----------MSGGAGLYRGM-------------------------------------------------------------

Query:  ------------------------EIGQRHLQTR------------------------------------------------------------------
                                E+   H  T                                                                   
Subjt:  ------------------------EIGQRHLQTR------------------------------------------------------------------

Query:  -YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------
         YL  + RMM  K+P   I   +TI+ RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK++F++W                               
Subjt:  -YLTMILRMMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVK-----------------------------

Query:  RVETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQRE
        R E+FAD+GSN P  ++    +   + D P MYS G  MS +D++ETR  + SE R  SS SKRKR GH  ++ +++R+ +EY N+QL  IAEW   QR+
Subjt:  RVETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILETRPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQRE

Query:  GESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN
          + TR  +V  L+ IPEL+ ++R R MRILMR+V DMKAFLEVP+ +K  YC++ILQ+N
Subjt:  GESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.1e-0436.92Show/hide
Query:  TEVVDVEEMVVMFLHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNT
        T  + +E  + +FL I+ ++++ R VQ  F  S ETISRHFN VL  +I +  +     QP +N+
Subjt:  TEVVDVEEMVVMFLHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTTGTTTTTGTGGGTTCCGTCTAAGTGTCATAATACCTGGATTAAGCCCCCTGGTATACTTGTGCAGGTTCGTAGTCCACACATTATAATGTATCGAGAAGA
AATCTTGGAGATATTAACGGTGTTCATTGTCTCCCAACGTAAGTTGCTAATGACGTTGGATATACTAATGAATGACCATAAGAGGTTACCACAAACTCCGTACGACATTA
GACATAGGATTAGGCGGCTAGCATATTTCCGTTTGATCCATGAGTTAGATCTTGACAATCGTTGGATTAGCATAACCGAAGTCGTTGATGTCGAGGAGATGGTGGTCATG
TTCCTACACATCCTGGCGAATGATGTGAAGAACCGAGTGGTCCAGAGGGAGTTCGTGCGATCCAGTGAGACAATTTCAAGGCATTTCAACCTGGTGTTGTTGCGCATTAT
ACGTCTGCATGACGAGCTGCTGAAAAAACCACAACCAGTAACGAACACGTGCATAGATCCCCGCTGGCGATGTTTCGAGTTCGTCAAGGACCCCGAAACATTCATGGACC
AGAGAAGAAGAGTCCATCCTCATGGAATGTCTGGTGGAGCTGGTCTCTATCGGGGGATGGAAATCGGACAACGGCACCTTCAGACCCGATACTTGACAATGATACTGAGA
ATGATGACGGAAAAGCTCCCAAGGTGTACCATCCAGGGGACCACTACTATTGAATGTCGGATCAAGACGCTTAAGAGAACCTTTCAGGCCATATCGGAGATGCGGGGCCC
TACCTGCAGTGGATTCGGTTGGAACGATGAGGCGAAATGCATAATTGTCGAGAAGAAGCTGTTTGAGAATTGGGTGAAGCGCGTTGAGACATTCGCGGATGTTGGTTCGA
ATGTGCCAAGCAGTTTCGAGCCATTTCTAGATGAAGATGGATACAATATGGACATCCCAAACATGTACAGCCAGGGACGTCCAATGTCACTCGAGGACATACTGGAAACA
CGACCTGATCAGTCGAGTGAGTGTAGGACGGATTCGAGCAGATCGAAGAGGAAGCGGGGAGGCCATAATGTGGAAACTGTGGAAGTCATTCGCAGCACCATGGAATATGC
GAATGACCAGCTCAAGGCAATTGCAGAATGGCTGAAGGAACAACGAGAAGGCGAAAGTATAACCCGTGCGGCAGTCGTTAGTCAATTACAGGGAATCCCTGAACTATCAA
GACTTAATAGGGTGCGCTGTATGAGGATACTTATGCGAAGCGTGATCGATATGAAAGCATTCTTGGAGGTACCCAACGAGCTTAAGTTGGACTACTGCACGGTCATTCTA
CAAGATAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTTGTTTTTGTGGGTTCCGTCTAAGTGTCATAATACCTGGATTAAGCCCCCTGGTATACTTGTGCAGGTTCGTAGTCCACACATTATAATGTATCGAGAAGA
AATCTTGGAGATATTAACGGTGTTCATTGTCTCCCAACGTAAGTTGCTAATGACGTTGGATATACTAATGAATGACCATAAGAGGTTACCACAAACTCCGTACGACATTA
GACATAGGATTAGGCGGCTAGCATATTTCCGTTTGATCCATGAGTTAGATCTTGACAATCGTTGGATTAGCATAACCGAAGTCGTTGATGTCGAGGAGATGGTGGTCATG
TTCCTACACATCCTGGCGAATGATGTGAAGAACCGAGTGGTCCAGAGGGAGTTCGTGCGATCCAGTGAGACAATTTCAAGGCATTTCAACCTGGTGTTGTTGCGCATTAT
ACGTCTGCATGACGAGCTGCTGAAAAAACCACAACCAGTAACGAACACGTGCATAGATCCCCGCTGGCGATGTTTCGAGTTCGTCAAGGACCCCGAAACATTCATGGACC
AGAGAAGAAGAGTCCATCCTCATGGAATGTCTGGTGGAGCTGGTCTCTATCGGGGGATGGAAATCGGACAACGGCACCTTCAGACCCGATACTTGACAATGATACTGAGA
ATGATGACGGAAAAGCTCCCAAGGTGTACCATCCAGGGGACCACTACTATTGAATGTCGGATCAAGACGCTTAAGAGAACCTTTCAGGCCATATCGGAGATGCGGGGCCC
TACCTGCAGTGGATTCGGTTGGAACGATGAGGCGAAATGCATAATTGTCGAGAAGAAGCTGTTTGAGAATTGGGTGAAGCGCGTTGAGACATTCGCGGATGTTGGTTCGA
ATGTGCCAAGCAGTTTCGAGCCATTTCTAGATGAAGATGGATACAATATGGACATCCCAAACATGTACAGCCAGGGACGTCCAATGTCACTCGAGGACATACTGGAAACA
CGACCTGATCAGTCGAGTGAGTGTAGGACGGATTCGAGCAGATCGAAGAGGAAGCGGGGAGGCCATAATGTGGAAACTGTGGAAGTCATTCGCAGCACCATGGAATATGC
GAATGACCAGCTCAAGGCAATTGCAGAATGGCTGAAGGAACAACGAGAAGGCGAAAGTATAACCCGTGCGGCAGTCGTTAGTCAATTACAGGGAATCCCTGAACTATCAA
GACTTAATAGGGTGCGCTGTATGAGGATACTTATGCGAAGCGTGATCGATATGAAAGCATTCTTGGAGGTACCCAACGAGCTTAAGTTGGACTACTGCACGGTCATTCTA
CAAGATAACGCTTGA
Protein sequenceShow/hide protein sequence
MESLFLWVPSKCHNTWIKPPGILVQVRSPHIIMYREEILEILTVFIVSQRKLLMTLDILMNDHKRLPQTPYDIRHRIRRLAYFRLIHELDLDNRWISITEVVDVEEMVVM
FLHILANDVKNRVVQREFVRSSETISRHFNLVLLRIIRLHDELLKKPQPVTNTCIDPRWRCFEFVKDPETFMDQRRRVHPHGMSGGAGLYRGMEIGQRHLQTRYLTMILR
MMTEKLPRCTIQGTTTIECRIKTLKRTFQAISEMRGPTCSGFGWNDEAKCIIVEKKLFENWVKRVETFADVGSNVPSSFEPFLDEDGYNMDIPNMYSQGRPMSLEDILET
RPDQSSECRTDSSRSKRKRGGHNVETVEVIRSTMEYANDQLKAIAEWLKEQREGESITRAAVVSQLQGIPELSRLNRVRCMRILMRSVIDMKAFLEVPNELKLDYCTVIL
QDNA