; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011574 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011574
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr07:9356834..9357244
RNA-Seq ExpressionPI0011574
SyntenyPI0011574
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-3166.67Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R +Q NTGN+ RG N+QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase2.0e-3166.67Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R +Q NTGN+ RG N+QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
A0A5A7T0E2 Reverse transcriptase2.2e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
A0A5D3B7E7 Reverse transcriptase2.2e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
A0A5D3BRZ6 Reverse transcriptase2.2e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
A0A5D3C4R1 Reverse transcriptase2.2e-3065.81Show/hide
Query:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS
        +  RLFD SNDSQD R H SSSSGG++NNR SSPK  GGD++ SGD R  Q NTGN+ RG ++QN  NRP +CFICK PHMAREC N+TAFNAFQA+LTS
Subjt:  SGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAFNAFQAALTS

Query:  NFDDKSSQTEGEDAQIE
        + D++ SQTEGE  Q E
Subjt:  NFDDKSSQTEGEDAQIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAAGATCAAGCTATACGAACAAAGCGTCCAAGAACTCTCGTCAGCATACGCAGCGGCAGACGACTATTTGACCAGTCCAATGACTCTCAAGATGCGAGATGTCA
TCAAAGTTCCTCATCTGGAGGAAACAAGAACAATCGTGCGAGTTCTCCAAAGGCCGGAGGGGGAGATAAACAGTCTAGTGGTGATCACAGGCCCTTTCAACCAAACACTG
GGAACACGGGTCGAGGACAGAACCACCAAAATTCTCACAATCGTCCCCCTGCATGTTTCATATGTAAGGAACCACACATGGCAAGAGAATGTCTGAACAGAACTGCCTTT
AACGCCTTTCAGGCCGCCTTGACCTCGAACTTTGATGACAAGAGTAGTCAAACAGAGGGCGAAGATGCCCAAATAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAAGATCAAGCTATACGAACAAAGCGTCCAAGAACTCTCGTCAGCATACGCAGCGGCAGACGACTATTTGACCAGTCCAATGACTCTCAAGATGCGAGATGTCA
TCAAAGTTCCTCATCTGGAGGAAACAAGAACAATCGTGCGAGTTCTCCAAAGGCCGGAGGGGGAGATAAACAGTCTAGTGGTGATCACAGGCCCTTTCAACCAAACACTG
GGAACACGGGTCGAGGACAGAACCACCAAAATTCTCACAATCGTCCCCCTGCATGTTTCATATGTAAGGAACCACACATGGCAAGAGAATGTCTGAACAGAACTGCCTTT
AACGCCTTTCAGGCCGCCTTGACCTCGAACTTTGATGACAAGAGTAGTCAAACAGAGGGCGAAGATGCCCAAATAGAATAA
Protein sequenceShow/hide protein sequence
MGEDQAIRTKRPRTLVSIRSGRRLFDQSNDSQDARCHQSSSSGGNKNNRASSPKAGGGDKQSSGDHRPFQPNTGNTGRGQNHQNSHNRPPACFICKEPHMARECLNRTAF
NAFQAALTSNFDDKSSQTEGEDAQIE