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PI0011583 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011583
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease H
Genome locationchr02:16763280..16763939
RNA-Seq ExpressionPI0011583
SyntenyPI0011583
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.1e-6262.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

KAA0050182.1 gag protease polyprotein [Cucumis melo var. makuwa]4.7e-6362.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNS+ G GY+S EP++ITGKGKTK A+TCHITVEE  DSKE +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI     RPSVFQR+     KD N                       + ++ T  T+ SAF+RLSVS+TR QKK  ISVS+K  LV +DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

KAA0060609.1 uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa]1.8e-6263.27Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EPI+ITGKGK K  +TCHITVEE  DSKE +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N                       + ++ TS T+ SAF+RLSVS+T+ QKK  ISVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.1e-6262.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.1e-6262.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H5.1e-6362.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

A0A5A7U2W9 Gag protease polyprotein2.3e-6362.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNS+ G GY+S EP++ITGKGKTK A+TCHITVEE  DSKE +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI     RPSVFQR+     KD N                       + ++ T  T+ SAF+RLSVS+TR QKK  ISVS+K  LV +DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

A0A5A7V4F2 Reverse transcriptase domain-containing protein8.7e-6363.27Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EPI+ITGKGK K  +TCHITVEE  DSKE +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N                       + ++ TS T+ SAF+RLSVS+T+ QKK  ISVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKN-----------------------EGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

A0A5D3BIH8 Uncharacterized protein5.1e-6362.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

A0A5D3D1E5 Ribonuclease H5.1e-6362.83Show/hide
Query:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS
        ++RT E FDPKAYKLMAKAGYDFTTRTELKSVKIF ER  LSPTQKKLQKQGY IPNSR G GY+S EP++ITGKGK K A+TCHITVEE  DS+E +K 
Subjt:  KKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKS

Query:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER
         SQRSSVFDRI  S  RPSVFQR+     KD N+                        ++ T  T+ SAF+RLSVS+TRDQKK  +SVS+K  LV  DE 
Subjt:  ESQRSSVFDRITSSTARPSVFQRLIVPTRKDKNE-----------------------GLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDER

Query:  IHSVVPSRTKRKLFVSVNIEGSLKVK
        I S  PSR KRK+FVSVN EGSLKVK
Subjt:  IHSVVPSRTKRKLFVSVNIEGSLKVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTAAAAAACGAACGACGGAGGAATTTGACCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGCTCAAAAGCGTGAAAAT
ATTTTATGAAAGGCATGGGCTTTCTCCTACGCAAAAGAAACTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACAAGGATTTGGGTATAAGTCTTTCGAGCCAATTC
AAATAACTGGTAAAGGAAAAACAAAAGCTGCTGACACATGCCACATTACTGTTGAAGAATGCAACGATTCTAAAGAAGACGAAAAAAGTGAAAGTCAAAGAAGTTCTGTT
TTTGATCGCATCACCTCTTCTACTGCACGCCCTTCAGTTTTCCAGAGGTTGATTGTACCGACAAGGAAGGACAAAAATGAAGGATTAAATACAACTTCGGTTACGCAAAC
CTCTGCCTTCCAAAGGTTAAGTGTGTCGATGACAAGAGACCAGAAGAAACCTCTCATATCTGTTTCAAGCAAACTTGGCTTAGTGATGAAGGACGAGAGAATTCACAGCG
TTGTTCCATCAAGAACGAAAAGGAAGTTGTTCGTCTCGGTAAACATAGAGGGTTCATTAAAAGTAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTAAAAAACGAACGACGGAGGAATTTGACCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGCTCAAAAGCGTGAAAAT
ATTTTATGAAAGGCATGGGCTTTCTCCTACGCAAAAGAAACTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACAAGGATTTGGGTATAAGTCTTTCGAGCCAATTC
AAATAACTGGTAAAGGAAAAACAAAAGCTGCTGACACATGCCACATTACTGTTGAAGAATGCAACGATTCTAAAGAAGACGAAAAAAGTGAAAGTCAAAGAAGTTCTGTT
TTTGATCGCATCACCTCTTCTACTGCACGCCCTTCAGTTTTCCAGAGGTTGATTGTACCGACAAGGAAGGACAAAAATGAAGGATTAAATACAACTTCGGTTACGCAAAC
CTCTGCCTTCCAAAGGTTAAGTGTGTCGATGACAAGAGACCAGAAGAAACCTCTCATATCTGTTTCAAGCAAACTTGGCTTAGTGATGAAGGACGAGAGAATTCACAGCG
TTGTTCCATCAAGAACGAAAAGGAAGTTGTTCGTCTCGGTAAACATAGAGGGTTCATTAAAAGTAAAATGA
Protein sequenceShow/hide protein sequence
MPSKKRTTEEFDPKAYKLMAKAGYDFTTRTELKSVKIFYERHGLSPTQKKLQKQGYFIPNSRQGFGYKSFEPIQITGKGKTKAADTCHITVEECNDSKEDEKSESQRSSV
FDRITSSTARPSVFQRLIVPTRKDKNEGLNTTSVTQTSAFQRLSVSMTRDQKKPLISVSSKLGLVMKDERIHSVVPSRTKRKLFVSVNIEGSLKVK