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PI0011596 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011596
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPhotosystem II PsbX
Genome locationchr02:2475759..2477191
RNA-Seq ExpressionPI0011596
SyntenyPI0011596
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009518 - Photosystem II PsbX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653441.1 hypothetical protein Csa_007456 [Cucumis sativus]7.5e-4894.96Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALPFT AT KPLSNDAFFNPLPSFKSRKPIA APISNGRI+AVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDP
        G VVVAILGAVIGVANFDP
Subjt:  GAVVVAILGAVIGVANFDP

KAG7023687.1 Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-4182.4Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLP---SFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTSAVS+ALP T+ATHK LSN AFFNPLP   S +SRK IAAAP SNG +VAVRSS KEKA+ G++AAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLP---SFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGAVVVAILGAVIGVANFDPVKR
        AAGG VVVAILGAVIGV+NFDPVKR
Subjt:  AAGGAVVVAILGAVIGVANFDPVKR

XP_008450907.1 PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]1.6e-5095.93Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSAVSMALPFT ATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSS KEKAVAGI+AAAL ASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKRS
        GAVVVAI GAVIGVANFDPVKRS
Subjt:  GAVVVAILGAVIGVANFDPVKRS

XP_031735956.1 uncharacterized protein LOC116401689 [Cucumis sativus]4.7e-5095.12Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALPFT AT KPLSNDAFFNPLPSFKSRKPIA APISNGRI+AVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKRS
        G VVVAILGAVIGVANFDPVKRS
Subjt:  GAVVVAILGAVIGVANFDPVKRS

XP_038878912.1 uncharacterized protein LOC120071001 [Benincasa hispida]4.4e-4893.5Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALP T ATHKPLSNDAFFNPLPSFKSRK IAAAP SNGRIVAVRSS KEKAVAGI+AAALTASMVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKRS
        GAVVVAILGAVIGVANFDPVKRS
Subjt:  GAVVVAILGAVIGVANFDPVKRS

TrEMBL top hitse value%identityAlignment
A0A0A0LWL3 Uncharacterized protein2.3e-5095.12Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALPFT AT KPLSNDAFFNPLPSFKSRKPIA APISNGRI+AVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKRS
        G VVVAILGAVIGVANFDPVKRS
Subjt:  GAVVVAILGAVIGVANFDPVKRS

A0A1S3BRD2 uncharacterized protein LOC1034923567.8e-5195.93Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSAVSMALPFT ATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSS KEKAVAGI+AAAL ASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKRS
        GAVVVAI GAVIGVANFDPVKRS
Subjt:  GAVVVAILGAVIGVANFDPVKRS

A0A6J1H8G2 uncharacterized protein LOC1114614527.3e-4181.6Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLP---SFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTS VS+ALP T+ATHK LSN AFFNPLP   S +SRK IAAAP S+GR+VAVRSS KEKA+ G++AAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLP---SFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGAVVVAILGAVIGVANFDPVKR
        AAGG VVVAILGAVIGV+NFDPVKR
Subjt:  AAGGAVVVAILGAVIGVANFDPVKR

A0A6J1HV97 uncharacterized protein LOC1114677551.0e-3477.05Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MAS  AVSMALP T A+ K LSNDAFFNPLPS +SRK I AAP    R+V V SS KEKAV G++AAAL+A+MVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GAVVVAILGAVIGVANFDPVKR
        G VV+AILGAVIGV+NFDPVKR
Subjt:  GAVVVAILGAVIGVANFDPVKR

A0A6J1J9Y5 uncharacterized protein LOC1114848834.3e-4182.4Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPL---PSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTS VS+ALP T+ATHK LSN AFFNPL   PS + RK IAAAP SNGR+VAVRSS KEKA+ G+SAAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPL---PSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGAVVVAILGAVIGVANFDPVKR
        AAGG VVVAILGAVIGV+NFDPVKR
Subjt:  AAGGAVVVAILGAVIGVANFDPVKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06520.1 photosystem II subunit X1.6e-2456Show/hide
Query:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRI--VAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIA
        MASTSA+S+  P       P     F  PLP     KP  A   + GR   + V++   +KA+ GISAAALTASMVIPE+AEAAGSG+SPSLKNFLLSIA
Subjt:  MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRI--VAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIA

Query:  AGGAVVVAILGAVIGVANFDPVKRS
        +GG V+  I+G V+GV+NFDPVKR+
Subjt:  AGGAVVVAILGAVIGVANFDPVKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCCGCTGTTTCAATGGCCTTACCATTCACCTCCGCCACCCACAAACCACTCTCCAACGACGCTTTCTTCAACCCATTGCCTTCTTTTAAGTCTCGCAA
GCCAATCGCTGCTGCTCCGATCTCCAACGGAAGGATCGTCGCCGTTCGATCGTCGTTCAAGGAGAAGGCTGTTGCTGGAATCTCGGCTGCTGCTCTGACGGCGTCGATGG
TGATTCCAGAGGTTGCGGAGGCTGCTGGGTCGGGAGTGTCGCCGTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGCGGTGGTGGTGGCGATATTGGGGGCG
GTCATCGGCGTCGCGAACTTTGACCCCGTGAAGCGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
CTATCATCAGTCTTGTAAATTAAATGTTCTATCATCAGTCTTGTAAATTAAATGTTCAAACCAACCTCTACCATTTACGAGTGCAAATTGGACCAGTTGATTAGTTTTAT
TCGTTAAAATTTTCTTAAATATTGTCCAATCGACCATTATTTAGTTCGATCAATTCGAACTTTCGAACAAAATTCGACACAAACATAGAGACTATGGAGGCCCAAAGGGA
GGCCCAAAAGTATAAGACCCTACCGGAGGATTTCAAAGGAGATGATGATTGGACCAATAAGATAACCTTATCCACCAATAAAGCATTGAGAACTTGCCACGTCAGACGAA
GATGAAGATTTCAACCTCACCAAAAATCCCCAATTTCCTCCACTTCTATTTCACTGGCCCACTCCCAATTCCCAAAAATCCCTAATCTCCAATTCTCATCTTCCCATAAT
TTTCCAAAAATCCTCAATTCCCTAATTCCCATCACCACCTTCCAATTCATCCCATCAATGGCTTCCACTTCCGCTGTTTCAATGGCCTTACCATTCACCTCCGCCACCCA
CAAACCACTCTCCAACGACGCTTTCTTCAACCCATTGCCTTCTTTTAAGTCTCGCAAGCCAATCGCTGCTGCTCCGATCTCCAACGGAAGGATCGTCGCCGTTCGATCGT
CGTTCAAGGAGAAGGCTGTTGCTGGAATCTCGGCTGCTGCTCTGACGGCGTCGATGGTGATTCCAGAGGTTGCGGAGGCTGCTGGGTCGGGAGTGTCGCCGTCGTTGAAG
AACTTCTTGCTGAGTATTGCGGCAGGTGGAGCGGTGGTGGTGGCGATATTGGGGGCGGTCATCGGCGTCGCGAACTTTGACCCCGTGAAGCGAAGCTGAGTGGAAATGTG
AAGTAAAAAAAAAGAAGTAAATTGTAATTTTTGTGTTTTACGTTTATTTAATCGTTGTCTTTGTGGTAATGTATGAATTTTTTAGCTGTAACTTTTTTCATTCAACTCTA
AATTTCTTCATCTCTCTCTTCATTTATGCCCAAATGAATTTTTATTCATCTTCTAAAATCACAAGATTTTCATTTAATTATTTATGAATGCTTATACGCTGAATTTGAAA
AGATGTTTAAAAAAAAAAGGAAAAAGTATTTTAAATCACAAAATTTCCTAAAATATTTATATATATTATAAAATACTCGATTTTCCCAGTAAGGTATATTATGCAAAATT
GATAGAAACATTTTTTTTTTCTTGTGGTGAAGGGCTAGTTTTAAGTTTATGTGTTGTGCAGTTTAAAAATTCATTCCTCTTAATAGTTTTTAATTAAAGGCCAATGAAAC
TCAAATGATAAATTTACCGGCAACATTTTGAGTCAAAAATGTCAAAAACAAAATATAAATTAGTTTTCTCGATACAATAATTAAAGTTTAATTAAAAATTAGAGATTTAA
ATC
Protein sequenceShow/hide protein sequence
MASTSAVSMALPFTSATHKPLSNDAFFNPLPSFKSRKPIAAAPISNGRIVAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAGGAVVVAILGA
VIGVANFDPVKRS