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PI0011639 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011639
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr06:13650260..13650571
RNA-Seq ExpressionPI0011639
SyntenyPI0011639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]7.4e-1751Show/hide
Query:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK
        +LE+ +LVPVG   KEV E++VDDP+ KGK I  K AS+T  PS PK+T  Q   A    + D+Y+KFI +   KPMRDG ED+FQ QA+ QE  +R +K
Subjt:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]2.7e-1140.57Show/hide
Query:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        EN TL  V    K + E+ +DDP+ K K++  ++ASKTR PS PKQ+      D     A   +DDD   Y+KFI++ + +P+R G ED+FQ QA++QE 
Subjt:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC

Query:  AMRHEK
         ++++K
Subjt:  AMRHEK

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]1.5e-1753Show/hide
Query:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK
        +LE+ +LVPVG   KEV E++VDDP+ KGK I  K AS+T  PS PK+T  Q   A    E D+Y+KFI +   KPMRDG ED+FQ QA+ QE  +R EK
Subjt:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]2.2e-1352.13Show/hide
Query:  LENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDD-YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        +E ATL   G   K+V EE VDD + KGK+IA+++  +   PS  KQT++Q  N   E +D+D Y+KFISDT  KPM D LEDIFQ Q+D+QEC
Subjt:  LENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDD-YYKFISDTIVKPMRDGLEDIFQTQADMQEC

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]2.7e-1140.57Show/hide
Query:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        EN TL  V    K + E+ +DDP+ K K++  ++ASKTR PS PKQ+      D     A   +DDD   Y+KFI++ + +P+R G ED+FQ QA++QE 
Subjt:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC

Query:  AMRHEK
         ++++K
Subjt:  AMRHEK

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein3.6e-1751Show/hide
Query:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK
        +LE+ +LVPVG   KEV E++VDDP+ KGK I  K AS+T  PS PK+T  Q   A    + D+Y+KFI +   KPMRDG ED+FQ QA+ QE  +R +K
Subjt:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK

A0A5A7TJU0 Uncharacterized protein1.3e-1140.57Show/hide
Query:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        EN TL  V    K + E+ +DDP+ K K++  ++ASKTR PS PKQ+      D     A   +DDD   Y+KFI++ + +P+R G ED+FQ QA++QE 
Subjt:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC

Query:  AMRHEK
         ++++K
Subjt:  AMRHEK

A0A5D3D8Q5 Uncharacterized protein7.3e-1853Show/hide
Query:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK
        +LE+ +LVPVG   KEV E++VDDP+ KGK I  K AS+T  PS PK+T  Q   A    E D+Y+KFI +   KPMRDG ED+FQ QA+ QE  +R EK
Subjt:  DLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK

A0A5D3DK59 Gag-pol1.1e-1352.13Show/hide
Query:  LENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDD-YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        +E ATL   G   K+V EE VDD + KGK+IA+++  +   PS  KQT++Q  N   E +D+D Y+KFISDT  KPM D LEDIFQ Q+D+QEC
Subjt:  LENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDD-YYKFISDTIVKPMRDGLEDIFQTQADMQEC

A0A5D3E1H0 Uncharacterized protein1.3e-1140.57Show/hide
Query:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC
        EN TL  V    K + E+ +DDP+ K K++  ++ASKTR PS PKQ+      D     A   +DDD   Y+KFI++ + +P+R G ED+FQ QA++QE 
Subjt:  ENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQT-----HDQPSNAAYEIEDDD---YYKFISDTIVKPMRDGLEDIFQTQADMQEC

Query:  AMRHEK
         ++++K
Subjt:  AMRHEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATGATCTAGAGAATGCGACCCTAGTTCCTGTTGGGCCGCAAGAAAAAGAAGTCTTTGAGGAGCTGGTTGATGACCCAATCCCCAAAGGTAAGGAAATCGCTTT
TAAGGAAGCAAGCAAGACACGTGCTCCCTCGTCGCCTAAACAAACACACGACCAGCCAAGCAATGCGGCATACGAAATTGAGGATGATGATTACTACAAGTTCATCAGCG
ATACAATTGTAAAACCAATGAGGGATGGACTTGAAGATATTTTTCAAACCCAAGCAGATATGCAAGAATGCGCGATGAGACATGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAATGATCTAGAGAATGCGACCCTAGTTCCTGTTGGGCCGCAAGAAAAAGAAGTCTTTGAGGAGCTGGTTGATGACCCAATCCCCAAAGGTAAGGAAATCGCTTT
TAAGGAAGCAAGCAAGACACGTGCTCCCTCGTCGCCTAAACAAACACACGACCAGCCAAGCAATGCGGCATACGAAATTGAGGATGATGATTACTACAAGTTCATCAGCG
ATACAATTGTAAAACCAATGAGGGATGGACTTGAAGATATTTTTCAAACCCAAGCAGATATGCAAGAATGCGCGATGAGACATGAGAAGTAG
Protein sequenceShow/hide protein sequence
MTNDLENATLVPVGPQEKEVFEELVDDPIPKGKEIAFKEASKTRAPSSPKQTHDQPSNAAYEIEDDDYYKFISDTIVKPMRDGLEDIFQTQADMQECAMRHEK