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PI0011644 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011644
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransportin-3 isoform X1
Genome locationchr06:18011459..18017055
RNA-Seq ExpressionPI0011644
SyntenyPI0011644
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048525.1 transportin-3 isoform X1 [Cucumis melo var. makuwa]5.3e-0489.66Show/hide
Query:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
        VVKVVILCGL QSLGRNL EYIMQPWTQ+
Subjt:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
KAG6581156.1 Protein root UVB sensitive 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0570Show/hide
Query:  PIMLKHWLKSTKVVKVVILCGLCQSLGRNLLEYIMQPWTQ
        PI+ +HWLKSTKVV+VV LCGL Q+LGR+LL++ MQP TQ
Subjt:  PIMLKHWLKSTKVVKVVILCGLCQSLGRNLLEYIMQPWTQ
TYK28316.1 transportin-3 isoform X1 [Cucumis melo var. makuwa]5.3e-0489.66Show/hide
Query:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
        VVKVVILCGL QSLGRNL EYIMQPWTQ+
Subjt:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
TrEMBL top hitse value%identityAlignment
A0A5A7U4I2 Transportin-3 isoform X12.6e-0489.66Show/hide
Query:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
        VVKVVILCGL QSLGRNL EYIMQPWTQ+
Subjt:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
A0A5D3DX38 Transportin-3 isoform X12.6e-0489.66Show/hide
Query:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
        VVKVVILCGL QSLGRNL EYIMQPWTQ+
Subjt:  VVKVVILCGLCQSLGRNLLEYIMQPWTQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGATTCTGCCAATGTCTCCCTCCTTTACGAACACAAAACTGTGTGTCGTGTTCATCTTCCACTTCTCTCCGTCGCGTGCTATTCCACCGATGTCTTCTCTAGCGT
TTCCCTCGCCGTTGTCTCCACCCAACCCATGCCATCATCTCCACCACTCTCTGTTCGTATCTCCATCCCGCGGAGCTACAGAAGATTAGTTTTCTTCAAGCTTTTGAATT
TCCTTTTGAACCTCAAGGACGTTGGCGTGAGTTCAAGGAAATTTATGGATGACCATATGTCATCCTTTTTCACCTCAGACAATGTAGGCAAGCTTAAATTTCATTTGCCA
GAAAGTTCACCGCAGACAGTTGTCATAAGAGAGAAGTTTAACTTTGGGCAATTCCCAATAATGCTGAAGCATTGGTTGAAGTCTACAAAGGTTGTAAAAGTTGTAATCCT
CTGTGGACTGTGCCAGTCGCTTGGGCGTAACCTGCTGGAGTATATAATGCAGCCATGGACACAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCGATTCTGCCAATGTCTCCCTCCTTTACGAACACAAAACTGTGTGTCGTGTTCATCTTCCACTTCTCTCCGTCGCGTGCTATTCCACCGATGTCTTCTCTAGCGT
TTCCCTCGCCGTTGTCTCCACCCAACCCATGCCATCATCTCCACCACTCTCTGTTCGTATCTCCATCCCGCGGAGCTACAGAAGATTAGTTTTCTTCAAGCTTTTGAATT
TCCTTTTGAACCTCAAGGACGTTGGCGTGAGTTCAAGGAAATTTATGGATGACCATATGTCATCCTTTTTCACCTCAGACAATGTAGGCAAGCTTAAATTTCATTTGCCA
GAAAGTTCACCGCAGACAGTTGTCATAAGAGAGAAGTTTAACTTTGGGCAATTCCCAATAATGCTGAAGCATTGGTTGAAGTCTACAAAGGTTGTAAAAGTTGTAATCCT
CTGTGGACTGTGCCAGTCGCTTGGGCGTAACCTGCTGGAGTATATAATGCAGCCATGGACACAGGTTTAG
Protein sequenceShow/hide protein sequence
MRDSANVSLLYEHKTVCRVHLPLLSVACYSTDVFSSVSLAVVSTQPMPSSPPLSVRISIPRSYRRLVFFKLLNFLLNLKDVGVSSRKFMDDHMSSFFTSDNVGKLKFHLP
ESSPQTVVIREKFNFGQFPIMLKHWLKSTKVVKVVILCGLCQSLGRNLLEYIMQPWTQV