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PI0011646 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011646
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr10:10956577..10956840
RNA-Seq ExpressionPI0011646
SyntenyPI0011646
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]8.8e-1963.01Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENK
        M + EYEK+F ELAKYALV + DEVDKCKRFE+G+RT IR P+TA+MDW + S++V+VAMRVE  + + K+NK
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENK

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.7e-1864.86Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KYA  +IVDE ++CKRFE+GLR  IR P+TA  DW DFS+LVEVA+RVE  L E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.8e-1969.44Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKEN
        MTV EYEK FTELAKYAL  +V+E DKCKRFE+GLRT IR  +T SMDW DFS+LVEV M VE C+ E K+N
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKEN

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]5.7e-1864.86Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KYA  +IVDE ++CKRFE+GLR  IR P+TA  DW DFS+LVEVA+RVE  L E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

TYJ96623.1 Retrovirus-related Pol polyprotein from transposon opus [Cucumis melo var. makuwa]9.7e-1862.16Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KY   +I DEV++CKRF +GLR  IR PMT   DW DFS+LVE A+RVE CL E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase2.8e-1864.86Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KYA  +IVDE ++CKRFE+GLR  IR P+TA  DW DFS+LVEVA+RVE  L E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

A0A5A7V3F2 Zf-CCHC domain-containing protein8.6e-2069.44Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKEN
        MTV EYEK FTELAKYAL  +V+E DKCKRFE+GLRT IR  +T SMDW DFS+LVEV M VE C+ E K+N
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKEN

A0A5D3BB91 Reverse transcriptase2.8e-1864.86Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KYA  +IVDE ++CKRFE+GLR  IR P+TA  DW DFS+LVEVA+RVE  L E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

A0A5D3BBD8 Retrovirus-related Pol polyprotein from transposon opus4.7e-1862.16Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD
        MTVAEYEKK+TEL+KY   +I DEV++CKRF +GLR  IR PMT   DW DFS+LVE A+RVE CL E+K  ++
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKD

A0A5D3D2P1 Putative Retrotransposon protein4.2e-1963.01Show/hide
Query:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENK
        M + EYEK+F ELAKYALV + DEVDKCKRFE+G+RT IR P+TA+MDW + S++V+VAMRVE  + + K+NK
Subjt:  MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTCGCAGAGTATGAAAAGAAATTTACAGAATTGGCTAAGTATGCGTTAGTCCTTATAGTTGATGAAGTGGATAAATGCAAACGATTTGAGGATGGTTTACGAAC
AACAATCAGAGTCCCAATGACGGCGAGCATGGACTGGTTCGATTTCTCCAGATTGGTAGAAGTTGCCATGAGAGTAGAGAATTGCTTAGCAGAACAAAAGGAAAACAAGG
ATGGGAGGGAAGGTTTCAGCGTCCACAATGTTAATAACGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTCGCAGAGTATGAAAAGAAATTTACAGAATTGGCTAAGTATGCGTTAGTCCTTATAGTTGATGAAGTGGATAAATGCAAACGATTTGAGGATGGTTTACGAAC
AACAATCAGAGTCCCAATGACGGCGAGCATGGACTGGTTCGATTTCTCCAGATTGGTAGAAGTTGCCATGAGAGTAGAGAATTGCTTAGCAGAACAAAAGGAAAACAAGG
ATGGGAGGGAAGGTTTCAGCGTCCACAATGTTAATAACGCGTGA
Protein sequenceShow/hide protein sequence
MTVAEYEKKFTELAKYALVLIVDEVDKCKRFEDGLRTTIRVPMTASMDWFDFSRLVEVAMRVENCLAEQKENKDGREGFSVHNVNNA