; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011707 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011707
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr09:16644608..16645165
RNA-Seq ExpressionPI0011707
SyntenyPI0011707
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.4e-4558.95Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        MT +VAIQLMGF N +DLW+ATQD FGVQ RAEEDFL+QM QTTRK N KMEEYL  MK+ VD+L QVG P+P R+L+SQVLLGLD+VYNLVI VIQGKP
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQ---RNTGNVGASVMTNVAQ--SRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
        +ISWLDMQS+LLIF+K L+HQN+Q   +  GN+  S   N+AQ  +       S+   Y  N   F+GQRG  N           N PTC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQ---RNTGNVGASVMTNVAQ--SRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]2.2e-5162.57Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        +T EV +QL+GF NAKD+WEAT D FGV+ RAEEDFL+Q FQTTRK N  ME+YLR MK+  D+L Q   PIP R+L+SQVLLGLD+VYN VI VIQGKP
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQ-SSNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
         ISWLDMQS+LLIF+KRL+HQNSQ+N GN+  +   N+AQSR  ++ + S N Q+  NN   F G RGG N NSRG G GRG++ TC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQ-SSNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-5165.03Show/hide
Query:  VAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKPNISW
        +AIQLMGF NAKDLWEATQDLFGVQ RAEEDFL+QMFQTTRK     E+YLR MK+  D L Q G P+P R+ +SQ LLGLD+VYN VIAVIQGKP ISW
Subjt:  VAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKPNISW

Query:  LDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQS-SNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
        +DMQSELL F+KRLEHQ++Q+NT N+  +V+ N+AQ+R  SD +  SN Q+  NN     GQRGG N   RG G GRGN+PTC
Subjt:  LDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQS-SNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

XP_031739914.1 uncharacterized protein LOC116403326 isoform X1 [Cucumis sativus]4.6e-4962.57Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        MTLEVA +LMGF NAK  WEAT  LFGVQ RAEEDFL+Q FQTTRK + KME+YL  MK+ VD+LSQ G  +P  +L+SQVLLGLD+VYNLVI VIQGK 
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNC--PFNGQRGGQNSNSRGHGHGRGNEPTC
        NISWLDMQSELLIF+K LEH N+QRNTGN+  +V  N+A+    ++ +S+N    + N    F+GQRGG   N RG G GR N+PTC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNC--PFNGQRGGQNSNSRGHGHGRGNEPTC

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]4.6e-4962.57Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        MTLEVA +LMGF NAK  WEAT  LFGVQ RAEEDFL+Q FQTTRK + KME+YL  MK+ VD+LSQ G  +P  +L+SQVLLGLD+VYNLVI VIQGK 
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNC--PFNGQRGGQNSNSRGHGHGRGNEPTC
        NISWLDMQSELLIF+K LEH N+QRNTGN+  +V  N+A+    ++ +S+N    + N    F+GQRGG   N RG G GR N+PTC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNC--PFNGQRGGQNSNSRGHGHGRGNEPTC

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein1.1e-5162.57Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        +T EV +QL+GF NAKD+WEAT D FGV+ RAEEDFL+Q FQTTRK N  ME+YLR MK+  D+L Q   PIP R+L+SQVLLGLD+VYN VI VIQGKP
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQ-SSNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
         ISWLDMQS+LLIF+KRL+HQNSQ+N GN+  +   N+AQSR  ++ + S N Q+  NN   F G RGG N NSRG G GRG++ TC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQ-SSNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

A0A5A7SIT7 Uncharacterized protein6.6e-4658.95Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        MT +VAIQLMGF N +DLW+ATQD FGVQ RAEEDFL+QM QTTRK N KMEEYL  MK+ VD+L QVG P+P R+L+SQVLLGLD+VYNLVI VIQGKP
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLEHQNSQ---RNTGNVGASVMTNVAQ--SRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
        +ISWLDMQS+LLIF+K L+HQN+Q   +  GN+  S   N+AQ  +       S+   Y  N   F+GQRG  N           N PTC
Subjt:  NISWLDMQSELLIFDKRLEHQNSQ---RNTGNVGASVMTNVAQ--SRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-948.1e-5265.03Show/hide
Query:  VAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKPNISW
        +AIQLMGF NAKDLWEATQDLFGVQ RAEEDFL+QMFQTTRK     E+YLR MK+  D L Q G P+P R+ +SQ LLGLD+VYN VIAVIQGKP ISW
Subjt:  VAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKPNISW

Query:  LDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQS-SNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC
        +DMQSELL F+KRLEHQ++Q+NT N+  +V+ N+AQ+R  SD +  SN Q+  NN     GQRGG N   RG G GRGN+PTC
Subjt:  LDMQSELLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQS-SNPQYQ-NNNCPFNGQRGGQNSNSRGHGHGRGNEPTC

A0A5D3E3L7 Uncharacterized protein6.2e-3668.07Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        M  +VA+QLMGFN AKDLWEA Q+LFG++ RAEE FL+  FQTTR+ N KME+YLR MK   D+L Q G P+P R L+SQVLLGLD+VYN V AVIQGKP
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSELLIFDKRLE
        +ISWLDMQSELLIF+  +E
Subjt:  NISWLDMQSELLIFDKRLE

A0A6J1D5J0 uncharacterized protein LOC1110175013.5e-3158.73Show/hide
Query:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP
        MT EVA Q+MG+ NA DLW A Q+LFGVQ +AEED+L+Q+FQ TRK ++KM ++LR MKS+ D+L Q G P+PTRSL+SQVLLGLD+ YN V+A IQGK 
Subjt:  MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKP

Query:  NISWLDMQSEL--LIFDKRLEHQNSQ
         ISW +MQ+E   +    + ++QNSQ
Subjt:  NISWLDMQSEL--LIFDKRLEHQNSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.1e-0730.54Show/hide
Query:  AKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGK-PNISWLDMQSELLI
        A+DLW + ++LF     A     +   +TT  D++ + EY + +KS  D L+ V  PI  R LV  +L GL + Y+ ++ VI+ K P  S+ + +S LL+
Subjt:  AKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGK-PNISWLDMQSELLI

Query:  FDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRG
         + RL ++ S+ +  +     ++NV  +  P   +    +Y NNN   N  RG     +RG G   G
Subjt:  FDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCTAGAAGTGGCTATTCAACTGATGGGGTTCAACAATGCAAAGGATCTGTGGGAAGCAACACAAGATCTATTTGGAGTCCAATTAAGGGCTGAAGAAGATTTTCT
TCAACAAATGTTTCAGACAACAAGGAAAGACAACATGAAAATGGAAGAATACTTGAGAACGATGAAGTCATATGTCGATAGTCTTAGTCAGGTTGGAATCCCTATACCCA
CGCGATCGTTAGTTTCACAGGTTCTCTTAGGACTTGATAAAGTTTATAATCTGGTCATTGCAGTCATTCAAGGGAAGCCAAACATCTCTTGGCTTGATATGCAGTCCGAA
CTTCTTATTTTTGACAAACGCTTGGAACATCAAAACTCACAGCGAAACACTGGAAATGTTGGAGCAAGTGTAATGACTAATGTTGCACAGAGTCGAGGACCGTCTGACTT
GCAGTCATCTAATCCACAGTATCAAAACAACAATTGTCCGTTCAATGGACAACGAGGTGGTCAAAATTCCAATAGCAGAGGTCATGGACATGGACGAGGTAACGAACCAA
CTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCCTAGAAGTGGCTATTCAACTGATGGGGTTCAACAATGCAAAGGATCTGTGGGAAGCAACACAAGATCTATTTGGAGTCCAATTAAGGGCTGAAGAAGATTTTCT
TCAACAAATGTTTCAGACAACAAGGAAAGACAACATGAAAATGGAAGAATACTTGAGAACGATGAAGTCATATGTCGATAGTCTTAGTCAGGTTGGAATCCCTATACCCA
CGCGATCGTTAGTTTCACAGGTTCTCTTAGGACTTGATAAAGTTTATAATCTGGTCATTGCAGTCATTCAAGGGAAGCCAAACATCTCTTGGCTTGATATGCAGTCCGAA
CTTCTTATTTTTGACAAACGCTTGGAACATCAAAACTCACAGCGAAACACTGGAAATGTTGGAGCAAGTGTAATGACTAATGTTGCACAGAGTCGAGGACCGTCTGACTT
GCAGTCATCTAATCCACAGTATCAAAACAACAATTGTCCGTTCAATGGACAACGAGGTGGTCAAAATTCCAATAGCAGAGGTCATGGACATGGACGAGGTAACGAACCAA
CTTGTTAG
Protein sequenceShow/hide protein sequence
MTLEVAIQLMGFNNAKDLWEATQDLFGVQLRAEEDFLQQMFQTTRKDNMKMEEYLRTMKSYVDSLSQVGIPIPTRSLVSQVLLGLDKVYNLVIAVIQGKPNISWLDMQSE
LLIFDKRLEHQNSQRNTGNVGASVMTNVAQSRGPSDLQSSNPQYQNNNCPFNGQRGGQNSNSRGHGHGRGNEPTC