; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011708 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011708
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRRM domain-containing protein
Genome locationchr07:23444090..23447475
RNA-Seq ExpressionPI0011708
SyntenyPI0011708
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141330.1 RNA-binding protein 2 isoform X1 [Cucumis sativus]7.9e-12693.09Show/hide
Query:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFAD
        MGDDAYTRYA SADR GSVARSGLSTYSEAPPLASYPNSTSIDQWHT PPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSG +ATGYASPFAD
Subjt:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFAD

Query:  SLGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFV
        SL SQRQDIAVGSSPGVMGR DIGHERANSL+LIRTAECDPS  RESN+LFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRR+GDKAMVLCFVEFV
Subjt:  SLGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFV

Query:  EAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        EAKFS+AAMEALQGYKFDDKKPDSP LKIQFAHFPF LPSNHDDRR
Subjt:  EAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

XP_008452748.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]1.0e-12894.69Show/hide
Query:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS
        MGDDAYTRYA SADR GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSGV+ATGYASPFADS
Subjt:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS

Query:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE
        L SQRQDIAVGSSPGVMGR DIGHERANSLS+IRTAECDP+S RESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKA VLCFVEFVE
Subjt:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE

Query:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        AKFS+AAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR+
Subjt:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

XP_008452749.1 PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo]4.1e-13095.08Show/hide
Query:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL
        MGDDAYTRYA SADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSGV+ATGYASPFADSL
Subjt:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL

Query:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA
         SQRQDIAVGSSPGVMGR DIGHERANSLS+IRTAECDP+S RESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKA VLCFVEFVEA
Subjt:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA

Query:  KFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        KFS+AAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR+
Subjt:  KFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

XP_011654186.1 RNA-binding protein 2 isoform X2 [Cucumis sativus]3.2e-12793.47Show/hide
Query:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS
        MGDDAYTRYA SADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHT PPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSG +ATGYASPFADS
Subjt:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS

Query:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE
        L SQRQDIAVGSSPGVMGR DIGHERANSL+LIRTAECDPS  RESN+LFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRR+GDKAMVLCFVEFVE
Subjt:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE

Query:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        AKFS+AAMEALQGYKFDDKKPDSP LKIQFAHFPF LPSNHDDRR
Subjt:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]1.4e-11486.12Show/hide
Query:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL
        MGDDAYTRYA SADRGSVARSGLSTYSEAPPL SYPNSTSIDQWH   PDY+ +DTNS+GPGAYGYTD+GG SNYPEPVIG V SG +A GY SPF DSL
Subjt:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL

Query:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA
         SQRQDIAVGSSPGVMG  D  HERANSLSL RTAE DP+SSRESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKAMVLCFVEF+EA
Subjt:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA

Query:  KFSRAAMEALQ-GYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        +++R AMEALQ GYKFDDKKPDSP+LKIQFAHFPFRLPSNHDDRR
Subjt:  KFSRAAMEALQ-GYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

TrEMBL top hitse value%identityAlignment
A0A0A0L0S1 RRM domain-containing protein3.8e-12693.09Show/hide
Query:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFAD
        MGDDAYTRYA SADR GSVARSGLSTYSEAPPLASYPNSTSIDQWHT PPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSG +ATGYASPFAD
Subjt:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHT-PPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFAD

Query:  SLGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFV
        SL SQRQDIAVGSSPGVMGR DIGHERANSL+LIRTAECDPS  RESN+LFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRR+GDKAMVLCFVEFV
Subjt:  SLGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFV

Query:  EAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        EAKFS+AAMEALQGYKFDDKKPDSP LKIQFAHFPF LPSNHDDRR
Subjt:  EAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

A0A1S3BU06 RNA-binding protein 2-like isoform X14.8e-12994.69Show/hide
Query:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS
        MGDDAYTRYA SADR GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSGV+ATGYASPFADS
Subjt:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS

Query:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE
        L SQRQDIAVGSSPGVMGR DIGHERANSLS+IRTAECDP+S RESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKA VLCFVEFVE
Subjt:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE

Query:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        AKFS+AAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR+
Subjt:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

A0A1S3BUL5 RNA-binding protein 2-like isoform X22.0e-13095.08Show/hide
Query:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL
        MGDDAYTRYA SADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSGV+ATGYASPFADSL
Subjt:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSL

Query:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA
         SQRQDIAVGSSPGVMGR DIGHERANSLS+IRTAECDP+S RESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKA VLCFVEFVEA
Subjt:  GSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEA

Query:  KFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        KFS+AAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR+
Subjt:  KFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

A0A5D3D938 RNA-binding protein 2-like isoform X14.8e-12994.69Show/hide
Query:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS
        MGDDAYTRYA SADR GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYM RDTNSLGPGAYGYTDLGGNS YPEPVIGGVTSGV+ATGYASPFADS
Subjt:  MGDDAYTRYATSADR-GSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS

Query:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE
        L SQRQDIAVGSSPGVMGR DIGHERANSLS+IRTAECDP+S RESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKA VLCFVEFVE
Subjt:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE

Query:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        AKFS+AAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR+
Subjt:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

A0A6J1CBB3 uncharacterized protein LOC1110099336.8e-10781.22Show/hide
Query:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLA-SYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS
        MGDDAY+RYA SADRGSVARS  STYSEAPPL+ SYPN+ SIDQWHT PPDY+ +DTNS G GAYGY D+G   NYPEPVIGGVTSGVTA GY SPF DS
Subjt:  MGDDAYTRYATSADRGSVARSGLSTYSEAPPLA-SYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADS

Query:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE
        L SQRQ+IAVGSSPG++G  D+GHERA+SL L R AEC P S+RESNILFVDGLPTDCTRREVGHLFRPF+GYKDIRVVHKEPRRSGDKA VLCFVEFVE
Subjt:  LGSQRQDIAVGSSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVE

Query:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR
        AK + AAM ALQGYKFDDKKPDSPALK+ FAHFPFRLPSNH+D R
Subjt:  AKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDRR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A2.1e-2043.14Show/hide
Query:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     +  A+ ALQGY+ D+ + DS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

F4HWF9 Nuclear speckle RNA-binding protein B3.6e-2046.53Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR
        SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  +  A+ ALQ Y+ D+ +PDS  L++QF   P   P     R
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR

Query:  R
        R
Subjt:  R

G7ID19 RNA-binding protein 21.0e-1932.99Show/hide
Query:  MHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSLGSQRQD-IAVGSSPGVMGRGDIGHER-----ANSLSLIRTA----ECDPSS
        M  DT  LG     +    G +++      G  S +   G+A    +  G    D  A+G   GV G  D+            L +   +    E  P  
Subjt:  MHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSLGSQRQD-IAVGSSPGVMGRGDIGHER-----ANSLSLIRTA----ECDPSS

Query:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFR
           S+ L+V+GLP+D T+REV H+FRPF+GY+++R+V KE +  G   ++LCFV+F     +  A+ ALQGYK D+  P+S  L++QF+  P R
Subjt:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 54.8e-1748.75Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPA
        S+ L+++GLP +CTRREV H+FRPF+G++++R+V+KE R  G    VLCFV+F     +  A+EALQG+  DD    +PA
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPA

Q8H0P8 RNA-binding protein 11.1e-2149.44Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFP
        S  L+++GLP+DCTRREV H+FRPF+GY+++R+V KE +  GD  ++LCFV+F     +  A+ ALQGYK D+  P+S  L++QF+ +P
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding2.5e-2146.53Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR
        SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  +  A+ ALQ Y+ D+ +PDS  L++QF   P   P     R
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR

Query:  R
        R
Subjt:  R

AT1G21320.2 nucleotide binding;nucleic acid binding2.5e-2146.53Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR
        SN L+V+GLP++C+RREV H+FRPF+GY+++R+V ++ + RSGD   VLCFV+F  +  +  A+ ALQ Y+ D+ +PDS  L++QF   P   P     R
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR-RSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHDDR

Query:  R
        R
Subjt:  R

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-2143.14Show/hide
Query:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     +  A+ ALQGY+ D+ + DS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-2143.14Show/hide
Query:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV H+FRPF+GY+++R+V K+ +      +VLCFV+F     +  A+ ALQGY+ D+ + DS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKPDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

AT2G47580.1 spliceosomal protein U1A5.1e-0633.33Show/hide
Query:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKK
        +NILFV  LP + T   +  LF  + G+K++R++  +P         + FVEF +   S  AM+ LQG+K    +
Subjt:  SNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACGATGCTTATACCAGATACGCCACTTCGGCAGATAGAGGAAGTGTAGCGAGGTCCGGCCTTTCAACCTATTCTGAAGCACCTCCTTTGGCATCTTACCCTAA
TTCGACCTCTATTGATCAGTGGCACACGCCTCCTCCTGATTATATGCATAGAGATACAAATTCGTTAGGACCTGGAGCTTATGGATATACTGACTTAGGAGGCAATAGTA
ATTATCCGGAACCAGTTATTGGCGGTGTGACATCTGGAGTGACTGCAACAGGCTATGCATCTCCTTTCGCAGATTCATTAGGAAGTCAAAGACAAGATATTGCAGTGGGC
AGTAGTCCAGGAGTGATGGGCAGGGGTGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCATCAGAACCGCTGAATGTGATCCGAGTTCATCGAGGGAATCAAACAT
TCTTTTCGTTGATGGACTTCCTACAGATTGTACTAGGAGAGAAGTAGGCCATCTCTTCCGTCCCTTTATGGGCTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGAC
GAAGTGGAGACAAGGCGATGGTATTATGCTTTGTTGAGTTCGTTGAAGCAAAATTTTCCCGGGCTGCAATGGAAGCTCTTCAAGGTTACAAATTCGATGACAAGAAACCT
GATTCCCCTGCTTTAAAGATTCAATTTGCACACTTTCCTTTCCGCTTACCGTCTAACCACGATGATAGGCGATAG
mRNA sequenceShow/hide mRNA sequence
AAAACAATTCTGTACGGACCAAACTACGTCTTTGTTGGGGGGGGTGGGGTAGTAGGTGAAAGCTAGGCGTGGCCGTGGGAGAGCTGGAGAAGAGACGAGGCCTTGGCCGG
GTCGCCGTTGCAAAGCCAAGCCATGGGAGACGATGCTTATACCAGATACGCCACTTCGGCAGATAGAGGAAGTGTAGCGAGGTCCGGCCTTTCAACCTATTCTGAAGCAC
CTCCTTTGGCATCTTACCCTAATTCGACCTCTATTGATCAGTGGCACACGCCTCCTCCTGATTATATGCATAGAGATACAAATTCGTTAGGACCTGGAGCTTATGGATAT
ACTGACTTAGGAGGCAATAGTAATTATCCGGAACCAGTTATTGGCGGTGTGACATCTGGAGTGACTGCAACAGGCTATGCATCTCCTTTCGCAGATTCATTAGGAAGTCA
AAGACAAGATATTGCAGTGGGCAGTAGTCCAGGAGTGATGGGCAGGGGTGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCATCAGAACCGCTGAATGTGATCCGA
GTTCATCGAGGGAATCAAACATTCTTTTCGTTGATGGACTTCCTACAGATTGTACTAGGAGAGAAGTAGGCCATCTCTTCCGTCCCTTTATGGGCTATAAAGATATCAGA
GTTGTTCACAAGGAGCCCAGACGAAGTGGAGACAAGGCGATGGTATTATGCTTTGTTGAGTTCGTTGAAGCAAAATTTTCCCGGGCTGCAATGGAAGCTCTTCAAGGTTA
CAAATTCGATGACAAGAAACCTGATTCCCCTGCTTTAAAGATTCAATTTGCACACTTTCCTTTCCGCTTACCGTCTAACCACGATGATAGGCGATAGATGTCCATATCCA
ACACCTTTGGGAACACGTGGTCTGAAGGAACTGGCAGGTTTTTGTTCGGCATTTTTCTCATACAAATTATGAGTAAGGTAACACAGCGAATCTGTACACGGTTTCCTGTC
GTTAGGTGCCTTGTGGACCCTATGGAATACTTGTCCATTCACAAACTGAATCGAGATTTAGATGGTTCAAGGGAAGCGTATGGCAAAGTGGTTGCCATCTATCATCATGT
CAGATCCTACAACTTTCAGTTTTTCATATGGGCTGGGATGAGCCCAAAGAAGAATCAAATGGGCTTTTTTCCAAAAAATCAAATTACTGTTTGGTTTCAGACATCATCTG
CTTTGGATCATGAAAATGACAAATAGTTACAAAGATTCCTGAAGAAGGTAAAAGCTTCATGTGAATGATGATTATTATATTTTCGCATAAAACCAACCCGTCCCCGACTG
AATAAAAGAAAACATATAGCAAATATATAAGGATGTAAGGTGAGGAGATTCAATGGTCGCTGATATTTCTGAATGATATTTCTGAATAAACAAAGGATACAGTCATAATA
ACTATAAAAAGAGGATAGTCTTAATAACTATAAAAAAAGATATAGTCTTGATAACTATATAAAAAGGATACAGTCTTAATAACTAAGAGGTTATGAGTTTAATTTATAGT
GGCTATGACATCTACCTAGTAATTAATTTCCTACGAGAATTTTTGACATCCAAATGTAGTAGGTTTAGATAGGTGGAACATTGAGATTAGTCAAGTTGCATCTAAGTTGG
CTCAAACATCTACGGATATAGAAAAGATATAGTATTTCTGTGGGGTTAAGGTGTAAGTTCATAACCTATGTTAGTATGTGTCTCAAGAATATATAGTTATACTGAGAAAG
GGGGAAAGGGGAGTCAAATATCACATTTTTCAAACTTGTGGGGTATGGAAGCATAAAACTGCCTATTGCAAGGGCTACAGCAAATAGACCATTAAATCTCGTTATTGACC
TTTTGTACTAGAACGATCTAGTGGGGGCGGGGGTGTATATTGTATTTTTCAATTATT
Protein sequenceShow/hide protein sequence
MGDDAYTRYATSADRGSVARSGLSTYSEAPPLASYPNSTSIDQWHTPPPDYMHRDTNSLGPGAYGYTDLGGNSNYPEPVIGGVTSGVTATGYASPFADSLGSQRQDIAVG
SSPGVMGRGDIGHERANSLSLIRTAECDPSSSRESNILFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRSGDKAMVLCFVEFVEAKFSRAAMEALQGYKFDDKKP
DSPALKIQFAHFPFRLPSNHDDRR