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PI0011718 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011718
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:3663945..3664259
RNA-Seq ExpressionPI0011718
SyntenyPI0011718
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-2358Show/hide
Query:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQG
        ++SH AAK LLNKLF YYDEL++VFE D  +    ETF D+G N P GYEGF   DGND+E P MYSQG+++S DD+   +P  +S GR  SSESKRK+G
Subjt:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQG
KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-2358.65Show/hide
Query:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR
        +I+  SH  AKG+LN+ F +YDEL +VF +D G+    ETF +VG NV GGYEGF  +DGND+EIP MYSQGL+MS DDIM  RP ++S GR +SS SKR
Subjt:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR

Query:  KQGG
        K  G
Subjt:  KQGG
KAA0060332.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-2259.6Show/hide
Query:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQ
        ++SH AAK LLNK FPYYDEL++VF++D      A+TF DVG N PGGYEGF   DGN+ E P +YSQG++MS DD+   RP+R+S GRT SS SKRK+
Subjt:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQ
KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-2260Show/hide
Query:  SHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGF-PTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQGG
        SH  A GLLN+ FP+Y+EL +VF +D  +  R ETF DV  NV G YEG   TDDGN++EIP MYSQGL+MS +DIM  RP R+SG R +SSE KRK+GG
Subjt:  SHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGF-PTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQGG
TYK11084.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-2460.58Show/hide
Query:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR
        +I+  SH AAKGLLN+ F +YDEL +VF +D G+    ETF +VG NV GGYEGF  +DGND+EIP MYSQGL+MS DDIM  RP ++S GR +SS SKR
Subjt:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR

Query:  KQGG
        K  G
Subjt:  KQGG
TrEMBL top hitse value%identityAlignment
A0A5A7UNI7 Retrotransposon protein8.9e-2458.65Show/hide
Query:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR
        +I+  SH  AKG+LN+ F +YDEL +VF +D G+    ETF +VG NV GGYEGF  +DGND+EIP MYSQGL+MS DDIM  RP ++S GR +SS SKR
Subjt:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR

Query:  KQGG
        K  G
Subjt:  KQGG
A0A5A7UWV7 Retrotransposon protein1.7e-2259.6Show/hide
Query:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQ
        ++SH AAK LLNK FPYYDEL++VF++D      A+TF DVG N PGGYEGF   DGN+ E P +YSQG++MS DD+   RP+R+S GRT SS SKRK+
Subjt:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQ
A0A5D3BQI7 Retrotransposon protein2.0e-2358Show/hide
Query:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQG
        ++SH AAK LLNKLF YYDEL++VFE D  +    ETF D+G N P GYEGF   DGND+E P MYSQG+++S DD+   +P  +S GR  SSESKRK+G
Subjt:  LQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQG
A0A5D3CIS8 Retrotransposon protein2.4e-2460.58Show/hide
Query:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR
        +I+  SH AAKGLLN+ F +YDEL +VF +D G+    ETF +VG NV GGYEGF  +DGND+EIP MYSQGL+MS DDIM  RP ++S GR +SS SKR
Subjt:  MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKR

Query:  KQGG
        K  G
Subjt:  KQGG
A0A5D3CX17 Retrotransposon protein2.9e-2260Show/hide
Query:  SHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGF-PTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQGG
        SH  A GLLN+ FP+Y+EL +VF +D  +  R ETF DV  NV G YEG   TDDGN++EIP MYSQGL+MS +DIM  RP R+SG R +SSE KRK+GG
Subjt:  SHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGF-PTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTCTACAAAGCCATCATGCCGCCAAGGGCCTCCTAAACAAACTGTTTCCCTATTACGACGAGCTAAGCTTCGTGTTCGAAAAAGATAGTGGTTCGAGAGCACG
CGCGGAGACGTTTCCCGATGTGGGGTTGAATGTGCCTGGAGGGTATGAGGGATTTCCCACTGACGATGGAAACGATCTGGAGATCCCTATGATGTACAGTCAAGGACTCA
ACATGTCGCTTGACGACATCATGGACCCACGACCCAATCGCTCGAGTGGGGGTAGGACTAGTTCAAGCGAATCGAAGAGGAAGCAGGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAATTCTACAAAGCCATCATGCCGCCAAGGGCCTCCTAAACAAACTGTTTCCCTATTACGACGAGCTAAGCTTCGTGTTCGAAAAAGATAGTGGTTCGAGAGCACG
CGCGGAGACGTTTCCCGATGTGGGGTTGAATGTGCCTGGAGGGTATGAGGGATTTCCCACTGACGATGGAAACGATCTGGAGATCCCTATGATGTACAGTCAAGGACTCA
ACATGTCGCTTGACGACATCATGGACCCACGACCCAATCGCTCGAGTGGGGGTAGGACTAGTTCAAGCGAATCGAAGAGGAAGCAGGGAGGCTAG
Protein sequenceShow/hide protein sequence
MIILQSHHAAKGLLNKLFPYYDELSFVFEKDSGSRARAETFPDVGLNVPGGYEGFPTDDGNDLEIPMMYSQGLNMSLDDIMDPRPNRSSGGRTSSSESKRKQGG