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PI0011731 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011731
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionThionin-like protein 2
Genome locationchr05:5157107..5158189
RNA-Seq ExpressionPI0011731
SyntenyPI0011731
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037367.1 thionin-like protein 2 [Cucumis melo var. makuwa]1.7e-0548.15Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        PV S+      +D H FCK+GC+   C K+ST ++L  +KVE+C N CDQ CMK
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

KAG5537638.1 hypothetical protein RHGRI_024926 [Rhododendron griersonianum]3.9e-0541.67Show/hide
Query:  CRRKLFVFRLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        C +   + ++    +T T VD+  N         FCK+GCS SLC+KIST +N   DKVESCV  C   C K
Subjt:  CRRKLFVFRLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

KAG5537639.1 hypothetical protein RHGRI_024926 [Rhododendron griersonianum]3.9e-0541.67Show/hide
Query:  CRRKLFVFRLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        C +   + ++    +T T VD+  N         FCK+GCS SLC+KIST +N   DKVESCV  C   C K
Subjt:  CRRKLFVFRLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-0550Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        P  + T+ N L D H FCK+GC+ SLC K ST  +    KVESCVN C + C+K
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

XP_004152967.1 thionin-like protein 2 [Cucumis sativus]1.3e-0554.9Show/hide
Query:  STTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        S  N N+ VD   FCK+GC+ S C K ST ++    KVESCVN CDQ+CMK
Subjt:  STTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

TrEMBL top hitse value%identityAlignment
A0A161YIC6 Uncharacterized protein3.2e-0537.5Show/hide
Query:  ESVAVCRRKLFVFRLFGGG-----STTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMC
        +++  C  + F   +  GG     S    VD   ++NQ    H FCK+GC+ SLC+ IST +N N D +E CV  C Q C
Subjt:  ESVAVCRRKLFVFRLFGGG-----STTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMC

A0A2R6QZT5 Thionin-like protein4.2e-0553.49Show/hide
Query:  VDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        VD H FCK+GC+ +LC+ IST +N   +KVESCV  C + C K
Subjt:  VDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

A0A4S4E3T3 Uncharacterized protein4.2e-0557.5Show/hide
Query:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        H+FCK+GC+ SLC+ IST +N   +KVESCVN C + C K
Subjt:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

A0A5D3BCH5 Thionin-like protein 28.4e-0648.15Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        PV S+      +D H FCK+GC+   C K+ST ++L  +KVE+C N CDQ CMK
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

A0A7J7FUW2 Uncharacterized protein4.2e-0557.5Show/hide
Query:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK
        H+FCK+GC+ SLC+ IST +N   +KVESCVN C + C K
Subjt:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMK

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 26.9e-0532.73Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR
        P   + ++N + +   FCK+GC+   C  +S+ +N NV++V +CV+ C   C K+
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.4.9e-0632.73Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR
        P   + ++N + +   FCK+GC+   C  +S+ +N NV++V +CV+ C   C K+
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR

AT1G12672.1 unknown protein4.9e-0637.04Show/hide
Query:  VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR
        V    +TN++     +CK+GCS   C  +S+ +N NVDKV  CV+ C   C  +
Subjt:  VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR

AT1G12672.2 unknown protein2.9e-0636.36Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR
        P     +TN++     +CK+GCS   C  +S+ +N NVDKV  CV+ C   C  +
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAGCGTGGCAGTGTGTCGTCGTAAGTTGTTTGTTTTCCGCTTATTTGGTGGAGGATCCACAACTACACCTGTGGATTCCACTACGAATACCAACCAATTGGT
TGATGTTCATAAATTTTGCAAAATTGGTTGTTCTGTTTCTCTCTGCAACAAGATTAGCACCCCAGAAAATTTGAATGTAGACAAAGTAGAAAGTTGTGTGAACCAGTGTG
ATCAAATGTGCATGAAGCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAGCGTGGCAGTGTGTCGTCGTAAGTTGTTTGTTTTCCGCTTATTTGGTGGAGGATCCACAACTACACCTGTGGATTCCACTACGAATACCAACCAATTGGT
TGATGTTCATAAATTTTGCAAAATTGGTTGTTCTGTTTCTCTCTGCAACAAGATTAGCACCCCAGAAAATTTGAATGTAGACAAAGTAGAAAGTTGTGTGAACCAGTGTG
ATCAAATGTGCATGAAGCGCTGA
Protein sequenceShow/hide protein sequence
MKESVAVCRRKLFVFRLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNQCDQMCMKR