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PI0011737 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011737
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:10936748..10936984
RNA-Seq ExpressionPI0011737
SyntenyPI0011737
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045605.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.8e-2168.42Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGS
        MK+ RI IPHL ETF+  ++LF TN+RK RN+DSE SI V+ EN IPP+PLV+QC P FELNNW+IKKTL+VTKGS
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGS

KAA0046609.1 hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa]1.3e-2167.53Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF T++RK  N+DSE SI V+ EN  PPHPLV++C P FELNNW+IKKTLKVTKGS+
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

KAE8648568.1 hypothetical protein Csa_007830, partial [Cucumis sativus]4.5e-2274.63Show/hide
Query:  IHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKV
        +HIPHLFETFR G+ LF+TN+RK RNKDS TS+VVI +NIIPPHPLVYQC P+FELN+WK KKTL +
Subjt:  IHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKV

TYK00092.1 protein NYNRIN-like [Cucumis melo var. makuwa]4.9e-2167.53Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF T++RK  N+DSE SI V+ ENI  PHPLV++C P FELNNW+IKKTLKVTKGS+
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

TYK09461.1 uncharacterized protein E5676_scaffold499G00540 [Cucumis melo var. makuwa]1.2e-2270.13Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF TN+RK RN+D E SIVV+F+N I PHPLV+QC P FELNNW+IKKTL++TKGSK
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

TrEMBL top hitse value%identityAlignment
A0A5A7TW53 Gag-pro-like protein1.8e-2168.42Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGS
        MK+ RI IPHL ETF+  ++LF TN+RK RN+DSE SI V+ EN IPP+PLV+QC P FELNNW+IKKTL+VTKGS
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGS

A0A5A7TZF3 Ribonuclease H6.3e-2267.53Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF T++RK  N+DSE SI V+ EN  PPHPLV++C P FELNNW+IKKTLKVTKGS+
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

A0A5A7V681 Retrotrans_gag domain-containing protein6.9e-2166.23Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF T++RK  N+DSE SI V+ ENI  PHPLV++C P FELNNW+IKK+LKVTKGS+
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

A0A5D3BMZ2 Protein NYNRIN-like2.4e-2167.53Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF T++RK  N+DSE SI V+ ENI  PHPLV++C P FELNNW+IKKTLKVTKGS+
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

A0A5D3CCB3 Uncharacterized protein5.7e-2370.13Show/hide
Query:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK
        MKE RI IPHL ETF+ G++LF TN+RK RN+D E SIVV+F+N I PHPLV+QC P FELNNW+IKKTL++TKGSK
Subjt:  MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAATGGAGAATACACATACCCCATTTATTCGAGACGTTTAGATATGGGAAAATGTTGTTTAGTACCAACCGAAGAAAGGAACGTAACAAAGATTCTGAGACCTC
GATTGTTGTTATCTTTGAGAATATCATTCCACCTCATCCATTGGTTTATCAGTGTTCACCAGAGTTTGAGTTGAACAATTGGAAGATCAAGAAAACGCTAAAAGTCACTA
AAGGATCTAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAATGGAGAATACACATACCCCATTTATTCGAGACGTTTAGATATGGGAAAATGTTGTTTAGTACCAACCGAAGAAAGGAACGTAACAAAGATTCTGAGACCTC
GATTGTTGTTATCTTTGAGAATATCATTCCACCTCATCCATTGGTTTATCAGTGTTCACCAGAGTTTGAGTTGAACAATTGGAAGATCAAGAAAACGCTAAAAGTCACTA
AAGGATCTAAAAATTAA
Protein sequenceShow/hide protein sequence
MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSKN