CuGenDBv2

Gene ID	PI0011739
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	60S ribosomal protein L35
Genome location	chr09:17804550..17806298
RNA-Seq Expression	PI0011739
Synteny	PI0011739
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001854 - Ribosomal protein L29/L35 IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_004149815.1 60S ribosomal protein L35 [Cucumis sativus]

1.1e-51

98.37

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMY+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_008463526.1 PREDICTED: 60S ribosomal protein L35 [Cucumis melo]

2.5e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKE+Y+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]

3.2e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQT2 Uncharacterized protein

5.4e-52

98.37

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMY+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A1S3CJH2 60S ribosomal protein L35

1.2e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKE+Y+PLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L35

1.6e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L35

1.6e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1JY13 60S ribosomal protein L35-like

2.0e-51

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SL TERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

4.1e-49

89.43

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-4

2.0e-48

88.62

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-3

1.3e-47

86.99

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Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L35

8.3e-50

90.24

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTK+Q 
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-1

1.2e-48

88.62

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

2.9e-50

89.43

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein

8.5e-50

88.62

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein

9.4e-49

86.99

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein

9.4e-49

86.99

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein

1.4e-49

88.62

Show/hide

Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTK+QA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATTTGTTGTTGCAGCTTAAGGATCTTAAGGCTGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTAC
CGGCGGTGCTCCAAACAAGTTATCCAAAATCAAGGTAGTGAGGTTGTCAATTGCTCAAGTATTGACAGTAATTTCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACA
AGAAGAAGAAGCTTTTACCTCTTGATCTGCGCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGTACCAGGCGTCCTTGAAAACTGAGAGACAGAAGAAGAAA
GAAATGTACTATCCATTGAGGAAATATGCTATTAAGGTGTAG

mRNA sequence

Show/hide mRNA sequence

GTTTTCTCGGTAGCAGCTCTTCCACCAGGTTACATCTCTTCTAGGGTTTCGCTGACTCGAAGACCGCACGATAAGAAATGGCGAGGATCAAGGTTCATGAGTTGAGGCAG
AAATCGAAGGCGGATTTGTTGTTGCAGCTTAAGGATCTTAAGGCTGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCAAACAAGTTATCCAAAATCAA
GGTAGTGAGGTTGTCAATTGCTCAAGTATTGACAGTAATTTCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTACCTCTTGATCTGCGCC
CAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGTACCAGGCGTCCTTGAAAACTGAGAGACAGAAGAAGAAAGAAATGTACTATCCATTGAGGAAATATGCTATT
AAGGTGTAGTAAGTATTATATCCAGTAGTCCATTTTTATATGCAACGGCAGACCAATTTTGTTGACAAGTTTTGTCTCGTAATCTTATGTCGGATACTCTTGAGGTTTCT
CCCTAAACCAAGGTGTTTTATTTTCATTGACAATTATATATTTTTGACAGTTGATAGCCTTTTTTCTTGTTTATTGAACTGTTCTTTTTCAGTCCAAAAAAACTTGTTCC
TTAGTACATTTTTTTTGCTTGTTAGCATGCGTTTTTTTTTAACCTTGGTCATCTCATTGTGTGTTTGGCATTGTTTGAATCTATTGAATTCGTATTGTTAATTAAACATT
TTTTCTTTTTGGTTGTCAAGTTTGTAATGATTTGATTGATTACTAACTTAT

Protein sequence

Show/hide protein sequence

MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKYQASLKTERQKKK
EMYYPLRKYAIKV

PI0011739 (gene) of Melon (PI 482460) v1 genome