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PI0011749 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011749
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:19229407..19229947
RNA-Seq ExpressionPI0011749
SyntenyPI0011749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033263.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-3953.38Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMG
        MAEK+P C ++ ++ I+C+IK +K+TFQ IA+M GP+CSGFGWN+E KCI+AEK LFDNW      GLLNKSF +YD+L YVFG+DRA G   ETF ++G
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMG

Query:  SNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT
        SN  G     F     N + P +Y QG+D+S DD+  +RP R+S+G T
Subjt:  SNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT

KAA0037928.1 retrotransposon protein [Cucumis melo var. makuwa]7.8e-4465Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNWGLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMGSNVLGR
        MAEKMPE NIQ +STI+CQ K +K+ FQ IA+M GP C+GF WN E+KCII EK L DNWGLLNKSF HYDDLCY+FGKDRA     +TFTN G NV   
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNWGLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMGSNVLGR

Query:  FKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKG
        ++GFF D  N+ EI MMY Q L MSPDDI+GTR   SS G
Subjt:  FKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKG

KAA0056436.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-3955.63Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P C ++  + I+C+IK +K+TFQ IAKM GP+CSGFGWN+E KCIIAEK LFDNW        GLLNKSF +YD+L YVFG DRA G   ETFTN
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSN-VLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT
        +GSN   G +  F +  GN  + P +Y QG+D+S DD+  +RP R+S+G T
Subjt:  MGSN-VLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT

KAA0062588.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-3852Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P C ++ ++ I+C+IK +K+TFQ IA+M GP+CSGFGWN+E KCI+AEK LFDNW        GLLNK F +YD+L YVFG+DRA G   ETF +
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT
        +GSN  G     F     N + P +Y QG+D+S DD+  +RP R+S+G T
Subjt:  MGSNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]4.0e-4056.76Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P  NIQ SSTI+C +K++KKT+  IA+M GPSCSGFGWN E +CIIAE++LFD+W        GLL+KSF +YDDL YVFGKDRA GAR ETF N
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK
        +GSNV   F     +   ++ +IP MY QG+ MSPD++ G R G++S+
Subjt:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.9e-4056.76Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P  NIQ SSTI+C +K++KKT+  IA+M GPSCSGFGWN E +CIIAE++LFD+W        GLL+KSF +YDDL YVFGKDRA GAR ETF N
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK
        +GSNV   F     +   ++ +IP MY QG+ MSPD++ G R G++S+
Subjt:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK

A0A5A7SS54 Retrotransposon protein3.6e-3953.38Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMG
        MAEK+P C ++ ++ I+C+IK +K+TFQ IA+M GP+CSGFGWN+E KCI+AEK LFDNW      GLLNKSF +YD+L YVFG+DRA G   ETF ++G
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMG

Query:  SNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT
        SN  G     F     N + P +Y QG+D+S DD+  +RP R+S+G T
Subjt:  SNVLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT

A0A5A7U0H7 Retrotransposon protein1.9e-4056.76Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P  NIQ SSTI+C +K++KKT+  IA+M GPSCSGFGWN E +CIIAE++LFD+W        GLL+KSF +YDDL YVFGKDRA GAR ETF N
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK
        +GSNV   F     +   ++ +IP MY QG+ MSPD++ G R G++S+
Subjt:  MGSNVLGRFKGFF-VDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSK

A0A5A7UQ49 Retrotransposon protein1.2e-3955.63Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN
        MAEK+P C ++  + I+C+IK +K+TFQ IAKM GP+CSGFGWN+E KCIIAEK LFDNW        GLLNKSF +YD+L YVFG DRA G   ETFTN
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNW--------GLLNKSFSHYDDLCYVFGKDRAAGARIETFTN

Query:  MGSN-VLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT
        +GSN   G +  F +  GN  + P +Y QG+D+S DD+  +RP R+S+G T
Subjt:  MGSN-VLGRFKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTT

A0A5D3D647 Retrotransposon protein3.8e-4465Show/hide
Query:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNWGLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMGSNVLGR
        MAEKMPE NIQ +STI+CQ K +K+ FQ IA+M GP C+GF WN E+KCII EK L DNWGLLNKSF HYDDLCY+FGKDRA     +TFTN G NV   
Subjt:  MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNWGLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMGSNVLGR

Query:  FKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKG
        ++GFF D  N+ EI MMY Q L MSPDDI+GTR   SS G
Subjt:  FKGFFVDYGNNTEIPMMYIQGLDMSPDDIVGTRPGRSSKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGAAGATGCCTGAATGTAACATCCAGGGTTCGTCGACAATAGAATGTCAGATAAAAAACATGAAGAAAACATTCCAGGTCATCGCAAAAATGCACGGACCGTC
GTGTAGTGGGTTCGGTTGGAACAATGAAGTGAAGTGCATCATCGCTGAAAAGAACTTGTTCGACAATTGGGGCCTCCTAAACAAGTCATTTTCCCATTACGACGACCTAT
GCTATGTATTTGGAAAAGATCGTGCGGCGGGAGCTCGCATAGAGACATTCACTAACATGGGGTCGAATGTGCTTGGAAGGTTCAAGGGATTTTTTGTTGATTATGGAAAC
AATACGGAGATCCCTATGATGTACATTCAGGGACTAGACATGTCACCTGATGACATCGTGGGCACACGACCCGGTCGTTCGAGTAAGGGTACGACTATTCAAGCAAATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGAAGATGCCTGAATGTAACATCCAGGGTTCGTCGACAATAGAATGTCAGATAAAAAACATGAAGAAAACATTCCAGGTCATCGCAAAAATGCACGGACCGTC
GTGTAGTGGGTTCGGTTGGAACAATGAAGTGAAGTGCATCATCGCTGAAAAGAACTTGTTCGACAATTGGGGCCTCCTAAACAAGTCATTTTCCCATTACGACGACCTAT
GCTATGTATTTGGAAAAGATCGTGCGGCGGGAGCTCGCATAGAGACATTCACTAACATGGGGTCGAATGTGCTTGGAAGGTTCAAGGGATTTTTTGTTGATTATGGAAAC
AATACGGAGATCCCTATGATGTACATTCAGGGACTAGACATGTCACCTGATGACATCGTGGGCACACGACCCGGTCGTTCGAGTAAGGGTACGACTATTCAAGCAAATTG
A
Protein sequenceShow/hide protein sequence
MAEKMPECNIQGSSTIECQIKNMKKTFQVIAKMHGPSCSGFGWNNEVKCIIAEKNLFDNWGLLNKSFSHYDDLCYVFGKDRAAGARIETFTNMGSNVLGRFKGFFVDYGN
NTEIPMMYIQGLDMSPDDIVGTRPGRSSKGTTIQAN