; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011777 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011777
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr06:25890244..25891438
RNA-Seq ExpressionPI0011777
SyntenyPI0011777
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.2e-0832.88Show/hide
Query:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE
        TIS    S  P+   S LK+ +I     A +PT    + +N+      AN S  K +S    D +L   K   +    ++S       KRKVS   P N+
Subjt:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE

Query:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET
        T F+NP++APAN S ++  ++   RS  K SS   PK +A Q           +L  QPLQ+V ++ D  K   +LTVDLG +  L+  ++       + 
Subjt:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET

Query:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN
         E I +T+   + ET P  + + P K+         K K      +   +KEDK ++ NSE FK QLV WLK N LKL        A TSTN
Subjt:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]1.5e-0932.22Show/hide
Query:  NSDNSLKTIS-SKRKVSCTFPRNETFFYNPNNAPANQSNDEVLKMKD-------LRSPPKNSSP-------KKKAQQKYYRAKKRPNTSLEIQPLQMVFN
        N  + ++T +  KRKVS   P+N+TFFYNP  APA     E L  KD          P K S P       K+K+ +  YR K   N  +E+   +++  
Subjt:  NSDNSLKTIS-SKRKVSCTFPRNETFFYNPNNAPANQSNDEVLKMKD-------LRSPPKNSSP-------KKKAQQKYYRAKKRPNTSLEIQPLQMVFN

Query:  ECDKNICNLTVDLGIISPLNDQTVVPESGQETLENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPNRKEDKYEENSEFKKQLVNWLKV
        E  +   NL VDLG ISPL+++  V         N  + +P+ I              +  Q   IK       L              FKKQL+NWLK 
Subjt:  ECDKNICNLTVDLGIISPLNDQTVVPESGQETLENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPNRKEDKYEENSEFKKQLVNWLKV

Query:  NNLKLAPTSTNDYPSSSSFGTNEQ--QEGNELNGNKEVP
        NNLKLAP   N+  SS     NE   + G +L+G+   P
Subjt:  NNLKLAPTSTNDYPSSSSFGTNEQ--QEGNELNGNKEVP

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.1e-0728.76Show/hide
Query:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKEDPTLSSIKNS----------------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQ
        S LK+ +I  +  A  P+F   + +N++NL +    S  E   LS I N                 +++L    SKRKVS   P N+T  +NP++APAN 
Subjt:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKEDPTLSSIKNS----------------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQ

Query:  SNDEVLKMKDLRSPPKNS------SPKKKAQQKYYRAKKRPNTSLEI-QPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQETLENIAVTSP
        S         L SP K        S KKK+      +K   N  + I QP+Q+V ++ D  K   +LTVDLG +  L+ ++++      +  E + +T+ 
Subjt:  SNDEVLKMKDLRSPPKNS------SPKKKAQQKYYRAKKRPNTSLEI-QPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQETLENIAVTSP

Query:  VAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLA-PTSTNDYPSSSSFGTNEQQEGNELNGNK
          + ET P  +  +   +     +   K K V   K    +KE+K +  ++  FKKQLV+WLK N LKL+  T ++   +S++   N+   G ++   +
Subjt:  VAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLA-PTSTNDYPSSSSFGTNEQQEGNELNGNK

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.2e-0832.88Show/hide
Query:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE
        TIS    S  P+   S LK+ +I     A +PT    + +N+      AN S  K +S    D +L   K   +    ++S       KRKVS   P N+
Subjt:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE

Query:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET
        T F+NP++APAN S ++  ++   RS  K SS   PK +A Q           +L  QPLQ+V ++ D  K   +LTVDLG +  L+  ++       + 
Subjt:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET

Query:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN
         E I +T+   + ET P  + + P K+         K K      +   +KEDK ++ NSE FK QLV WLK N LKL        A TSTN
Subjt:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN

TYK05719.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.8e-0829.66Show/hide
Query:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKE-------DPTLSSIKNS-------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQSN
        S LK+ +I  +  A +P+F   + +N++NL      S  E       D  L   K         +++L    SKRKVS   P N+T  +NP++APAN S 
Subjt:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKE-------DPTLSSIKNS-------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQSN

Query:  DEVLKMKDLRSPPKNSSPKKKAQQKYYRAKKRPNTSLE-------------IQPLQMVFN--ECDKNICNLTVDLGIISPLN-DQTVVPESGQETLENIA
                    P  SSP+KK +    R+ K+ ++S++              QP+Q+V +  E  K   +LTVDLG +  L+ +++       + +E I 
Subjt:  DEVLKMKDLRSPPKNSSPKKKAQQKYYRAKKRPNTSLE-------------IQPLQMVFN--ECDKNICNLTVDLGIISPLN-DQTVVPESGQETLENIA

Query:  VTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLAPTSTNDYPSSSSFGTN
        +T+ V + ET P  +  +   +     +   K K V   K    +KE+K +  ++  FKKQLV+WLK N LKL   ST+   S ++  TN
Subjt:  VTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLAPTSTNDYPSSSSFGTN

TrEMBL top hitse value%identityAlignment
A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein3.0e-0832.88Show/hide
Query:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE
        TIS    S  P+   S LK+ +I     A +PT    + +N+      AN S  K +S    D +L   K   +    ++S       KRKVS   P N+
Subjt:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE

Query:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET
        T F+NP++APAN S ++  ++   RS  K SS   PK +A Q           +L  QPLQ+V ++ D  K   +LTVDLG +  L+  ++       + 
Subjt:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET

Query:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN
         E I +T+   + ET P  + + P K+         K K      +   +KEDK ++ NSE FK QLV WLK N LKL        A TSTN
Subjt:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN

A0A5A7V6K4 Uncharacterized protein7.1e-1032.22Show/hide
Query:  NSDNSLKTIS-SKRKVSCTFPRNETFFYNPNNAPANQSNDEVLKMKD-------LRSPPKNSSP-------KKKAQQKYYRAKKRPNTSLEIQPLQMVFN
        N  + ++T +  KRKVS   P+N+TFFYNP  APA     E L  KD          P K S P       K+K+ +  YR K   N  +E+   +++  
Subjt:  NSDNSLKTIS-SKRKVSCTFPRNETFFYNPNNAPANQSNDEVLKMKD-------LRSPPKNSSP-------KKKAQQKYYRAKKRPNTSLEIQPLQMVFN

Query:  ECDKNICNLTVDLGIISPLNDQTVVPESGQETLENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPNRKEDKYEENSEFKKQLVNWLKV
        E  +   NL VDLG ISPL+++  V         N  + +P+ I              +  Q   IK       L              FKKQL+NWLK 
Subjt:  ECDKNICNLTVDLGIISPLNDQTVVPESGQETLENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPNRKEDKYEENSEFKKQLVNWLKV

Query:  NNLKLAPTSTNDYPSSSSFGTNEQ--QEGNELNGNKEVP
        NNLKLAP   N+  SS     NE   + G +L+G+   P
Subjt:  NNLKLAPTSTNDYPSSSSFGTNEQ--QEGNELNGNKEVP

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein3.0e-0832.88Show/hide
Query:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE
        TIS    S  P+   S LK+ +I     A +PT    + +N+      AN S  K +S    D +L   K   +    ++S       KRKVS   P N+
Subjt:  TISSELSSFPPKLFESNLKAGLIVEETGAENPTF--SKAINE------ANLSSCKRIS-YKEDPTLSSIKNSDNSLKTISS-------KRKVSCTFPRNE

Query:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET
        T F+NP++APAN S ++  ++   RS  K SS   PK +A Q           +L  QPLQ+V ++ D  K   +LTVDLG +  L+  ++       + 
Subjt:  TFFYNPNNAPANQSNDEVLKMKDLRSPPKNSS---PKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQET

Query:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN
         E I +T+   + ET P  + + P K+         K K      +   +KEDK ++ NSE FK QLV WLK N LKL        A TSTN
Subjt:  LENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEVKLGPN---RKEDKYEE-NSE-FKKQLVNWLKVNNLKL--------APTSTN

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein1.5e-0728.76Show/hide
Query:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKEDPTLSSIKNS----------------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQ
        S LK+ +I  +  A  P+F   + +N++NL +    S  E   LS I N                 +++L    SKRKVS   P N+T  +NP++APAN 
Subjt:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKEDPTLSSIKNS----------------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQ

Query:  SNDEVLKMKDLRSPPKNS------SPKKKAQQKYYRAKKRPNTSLEI-QPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQETLENIAVTSP
        S         L SP K        S KKK+      +K   N  + I QP+Q+V ++ D  K   +LTVDLG +  L+ ++++      +  E + +T+ 
Subjt:  SNDEVLKMKDLRSPPKNS------SPKKKAQQKYYRAKKRPNTSLEI-QPLQMVFNECD--KNICNLTVDLGIISPLN-DQTVVPESGQETLENIAVTSP

Query:  VAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLA-PTSTNDYPSSSSFGTNEQQEGNELNGNK
          + ET P  +  +   +     +   K K V   K    +KE+K +  ++  FKKQLV+WLK N LKL+  T ++   +S++   N+   G ++   +
Subjt:  VAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLA-PTSTNDYPSSSSFGTNEQQEGNELNGNK

A0A5D3C5P2 LINE-1 retrotransposable element ORF2 protein1.3e-0829.66Show/hide
Query:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKE-------DPTLSSIKNS-------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQSN
        S LK+ +I  +  A +P+F   + +N++NL      S  E       D  L   K         +++L    SKRKVS   P N+T  +NP++APAN S 
Subjt:  SNLKAGLIVEETGAENPTF--SKAINEANLSSCKRISYKE-------DPTLSSIKNS-------DNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQSN

Query:  DEVLKMKDLRSPPKNSSPKKKAQQKYYRAKKRPNTSLE-------------IQPLQMVFN--ECDKNICNLTVDLGIISPLN-DQTVVPESGQETLENIA
                    P  SSP+KK +    R+ K+ ++S++              QP+Q+V +  E  K   +LTVDLG +  L+ +++       + +E I 
Subjt:  DEVLKMKDLRSPPKNSSPKKKAQQKYYRAKKRPNTSLE-------------IQPLQMVFN--ECDKNICNLTVDLGIISPLN-DQTVVPESGQETLENIA

Query:  VTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLAPTSTNDYPSSSSFGTN
        +T+ V + ET P  +  +   +     +   K K V   K    +KE+K +  ++  FKKQLV+WLK N LKL   ST+   S ++  TN
Subjt:  VTSPVAILETLPHCRTSLPRKTKQQQASIKAKAKEV---KLGPNRKEDKYE--ENSEFKKQLVNWLKVNNLKLAPTSTNDYPSSSSFGTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGTACCATTTCATCGGAACTTTCTTCATTTCCGCCGAAACTTTTTGAATCCAACCTGAAGGCTGGATTAATTGTTGAAGAGACAGGGGCAGAAAATCCCACATT
TTCCAAGGCCATAAATGAAGCTAATCTTTCTTCATGCAAACGGATATCATATAAGGAAGATCCTACCTTATCTTCAATTAAGAACTCTGACAACTCATTAAAGACTATCT
CCTCAAAGAGGAAAGTGAGTTGTACTTTCCCCAGAAATGAAACATTCTTCTATAATCCTAATAATGCACCAGCTAACCAAAGTAATGATGAAGTGCTGAAGATGAAGGAT
TTAAGAAGCCCACCAAAGAATTCTTCACCAAAGAAAAAGGCCCAACAGAAATATTATAGAGCCAAAAAAAGGCCCAACACAAGTCTGGAAATTCAACCTCTTCAGATGGT
CTTCAATGAATGTGATAAAAATATTTGCAACTTGACAGTGGACCTGGGTATCATTTCCCCCCTCAATGACCAAACTGTAGTACCTGAAAGCGGACAAGAAACTCTAGAGA
ATATTGCAGTCACAAGCCCAGTAGCAATACTAGAGACTCTCCCTCATTGTCGTACTTCTCTTCCAAGGAAAACTAAACAACAACAGGCTTCAATAAAAGCAAAGGCCAAA
GAAGTTAAGTTAGGCCCAAATAGAAAGGAAGACAAGTATGAGGAAAACAGTGAATTCAAAAAGCAGTTAGTCAATTGGCTCAAAGTTAACAACTTGAAACTGGCTCCAAC
ATCAACAAATGATTATCCAAGCTCTTCTTCTTTTGGGACCAATGAACAACAAGAAGGTAACGAACTAAATGGGAACAAGGAAGTTCCGGGTCCACACTGTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGTACCATTTCATCGGAACTTTCTTCATTTCCGCCGAAACTTTTTGAATCCAACCTGAAGGCTGGATTAATTGTTGAAGAGACAGGGGCAGAAAATCCCACATT
TTCCAAGGCCATAAATGAAGCTAATCTTTCTTCATGCAAACGGATATCATATAAGGAAGATCCTACCTTATCTTCAATTAAGAACTCTGACAACTCATTAAAGACTATCT
CCTCAAAGAGGAAAGTGAGTTGTACTTTCCCCAGAAATGAAACATTCTTCTATAATCCTAATAATGCACCAGCTAACCAAAGTAATGATGAAGTGCTGAAGATGAAGGAT
TTAAGAAGCCCACCAAAGAATTCTTCACCAAAGAAAAAGGCCCAACAGAAATATTATAGAGCCAAAAAAAGGCCCAACACAAGTCTGGAAATTCAACCTCTTCAGATGGT
CTTCAATGAATGTGATAAAAATATTTGCAACTTGACAGTGGACCTGGGTATCATTTCCCCCCTCAATGACCAAACTGTAGTACCTGAAAGCGGACAAGAAACTCTAGAGA
ATATTGCAGTCACAAGCCCAGTAGCAATACTAGAGACTCTCCCTCATTGTCGTACTTCTCTTCCAAGGAAAACTAAACAACAACAGGCTTCAATAAAAGCAAAGGCCAAA
GAAGTTAAGTTAGGCCCAAATAGAAAGGAAGACAAGTATGAGGAAAACAGTGAATTCAAAAAGCAGTTAGTCAATTGGCTCAAAGTTAACAACTTGAAACTGGCTCCAAC
ATCAACAAATGATTATCCAAGCTCTTCTTCTTTTGGGACCAATGAACAACAAGAAGGTAACGAACTAAATGGGAACAAGGAAGTTCCGGGTCCACACTGTTTTGAATGA
Protein sequenceShow/hide protein sequence
MWGTISSELSSFPPKLFESNLKAGLIVEETGAENPTFSKAINEANLSSCKRISYKEDPTLSSIKNSDNSLKTISSKRKVSCTFPRNETFFYNPNNAPANQSNDEVLKMKD
LRSPPKNSSPKKKAQQKYYRAKKRPNTSLEIQPLQMVFNECDKNICNLTVDLGIISPLNDQTVVPESGQETLENIAVTSPVAILETLPHCRTSLPRKTKQQQASIKAKAK
EVKLGPNRKEDKYEENSEFKKQLVNWLKVNNLKLAPTSTNDYPSSSSFGTNEQQEGNELNGNKEVPGPHCFE