| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036604.1 polyprotein [Cucumis melo var. makuwa] | 2.5e-76 | 41.94 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+DIQEGRC+IDTW+ LK+EL S FPENVEIL R KL +L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------------------------------------ISNWKGKVVITV-----------------------------------------------
KD ++ K + VI V
Subjt: KKD--------------------------------------ISNWKGKVVITV-----------------------------------------------
Query: -------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMA
TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS AT+NF+ +V+A+RLNL W+ DAG+MKA+NS A
Subjt: -------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMA
Query: LPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------S
LPI ++ DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T ++QP+ +KMISA+QLKK L+ + S
Subjt: LPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------S
Query: VGATEETTPQDTLCILQKCQEV
+ ET P++ + +L+K ++V
Subjt: VGATEETTPQDTLCILQKCQEV
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| KAA0060480.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.8e-77 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+D+QEGRC+IDTW+ LK+EL S FPENVEILAR KL +L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KK-------------------------------------DISN-----------------------------------------------WKGKVVITV-
+K D+SN W+G + +
Subjt: KK-------------------------------------DISN-----------------------------------------------WKGKVVITV-
Query: ------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMAL
TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS AT+NF+ + +A+RLNL W+ DAG+MKA+NS AL
Subjt: ------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMAL
Query: PITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------SV
PI ++ DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T ++QP+ +KMISA+QLKK L+ + S
Subjt: PITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------SV
Query: GATEETTPQDTLCILQKCQEV
+ ET P++ + +L+K ++V
Subjt: GATEETTPQDTLCILQKCQEV
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| KAA0065409.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.0e-74 | 39.56 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
MEQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+DIQEGRC+IDTW+ LK+EL S FPENVEILAR KL +L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KK-------------------------------------DISN-----------------------------------------------WKG-------
+K D+SN W+G
Subjt: KK-------------------------------------DISN-----------------------------------------------WKG-------
Query: --------------------KVVITVI--------------TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDS
K TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS
Subjt: --------------------KVVITVI--------------TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDS
Query: RATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTK
AT+NF+ +V+A+RLNL W+ DAG+MKA+NS ALPI ++ DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T
Subjt: RATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTK
Query: IKQPNEMKMISALQLKKNLAHE----------SVGATEETTPQDTLCILQKCQEV
++QP+ +KMISA+QLKK L+ + S + ET P++ + +L+K ++V
Subjt: IKQPNEMKMISALQLKKNLAHE----------SVGATEETTPQDTLCILQKCQEV
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| KAA0068003.1 uncharacterized protein E6C27_scaffold138G001940 [Cucumis melo var. makuwa] | 1.0e-74 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYF+ TNTVTE++K+TLATM+L EDAKLWWRS++MDIQEGRC+IDTW+ LK+EL S FPENVEILAR KL L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
+KD + +W K K+ +
Subjt: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
Query: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
ED+ ++E E ++ A++++ LQK E KGGL+YV WIN KSTMVDS AT+NF+ + +ARRL L W+ D+GKMKA+NS+ALPI ++
Subjt: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
Query: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
DDFDVVLG+EFLLEH+VIP+ A CL I GS T+V I+QPN KMISA+QL ++ A E +GA E ET
Subjt: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
Query: TPQDTLCILQKCQEVDNLSHP
P+DTLC+ +KC V S P
Subjt: TPQDTLCILQKCQEVDNLSHP
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| TYK18124.1 uncharacterized protein E5676_scaffold411G00520 [Cucumis melo var. makuwa] | 1.0e-74 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYF+ TNTVTE++K+TLATM+L EDAKLWWRS++MDIQEGRC+IDTW+ LK+EL S FPENVEILAR KL L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
+KD + +W K K+ +
Subjt: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
Query: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
ED+ ++E E ++ A++++ LQK E KGGL+YV WIN KSTMVDS AT+NF+ + +ARRL L W+ D+GKMKA+NS+ALPI ++
Subjt: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
Query: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
DDFDVVLG+EFLLEH+VIP+ A CL I GS T+V I+QPN KMISA+QL ++ A E +GA E ET
Subjt: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
Query: TPQDTLCILQKCQEVDNLSHP
P+DTLC+ +KC V S P
Subjt: TPQDTLCILQKCQEVDNLSHP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ91 Polyprotein | 1.2e-76 | 41.94 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+DIQEGRC+IDTW+ LK+EL S FPENVEIL R KL +L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------------------------------------ISNWKGKVVITV-----------------------------------------------
KD ++ K + VI V
Subjt: KKD--------------------------------------ISNWKGKVVITV-----------------------------------------------
Query: -------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMA
TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS AT+NF+ +V+A+RLNL W+ DAG+MKA+NS A
Subjt: -------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMA
Query: LPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------S
LPI ++ DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T ++QP+ +KMISA+QLKK L+ + S
Subjt: LPITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------S
Query: VGATEETTPQDTLCILQKCQEV
+ ET P++ + +L+K ++V
Subjt: VGATEETTPQDTLCILQKCQEV
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| A0A5A7UXR6 Reverse transcriptase | 1.5e-74 | 38.9 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+DIQEGRC+IDTW+ LK+ELCS FPENVEILAR KL +L+H ++EYVK+F GL+LDI DMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD-----------------------------------------------------------------------------------------------IS
+KD +S
Subjt: KKD-----------------------------------------------------------------------------------------------IS
Query: N----------------WKGKVVITVI--------------TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDS
N W K TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS
Subjt: N----------------WKGKVVITVI--------------TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDS
Query: RATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRV---------------------IDDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTK
AT+NF+ +++A+RLNL W+ DAG+MKA+NS ALPI + +DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T
Subjt: RATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRV---------------------IDDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTK
Query: IKQPNEMKMISALQLKKNLAHE----------SVGATEETTPQDTLCILQKCQEV
++QP+ +KMISA+QLKK L+ + S + ET P++ + +L+K ++V
Subjt: IKQPNEMKMISALQLKKNLAHE----------SVGATEETTPQDTLCILQKCQEV
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| A0A5A7UZE9 Reverse transcriptase | 1.9e-77 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYFR TNTVTE++K+TLATMHL EDAKLWWRS+F+D+QEGRC+IDTW+ LK+EL S FPENVEILAR KL +L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KK-------------------------------------DISN-----------------------------------------------WKGKVVITV-
+K D+SN W+G + +
Subjt: KK-------------------------------------DISN-----------------------------------------------WKGKVVITV-
Query: ------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMAL
TE + + EE + P++GAL+FL LQK + E+ + GLMYV WIN TKSTMVDS AT+NF+ + +A+RLNL W+ DAG+MKA+NS AL
Subjt: ------ITEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMAL
Query: PITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------SV
PI ++ DDFDVVLG+EFLLEH+VIP+ LA CLVI G T ++V T ++QP+ +KMISA+QLKK L+ + S
Subjt: PITRVI---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHE----------SV
Query: GATEETTPQDTLCILQKCQEV
+ ET P++ + +L+K ++V
Subjt: GATEETTPQDTLCILQKCQEV
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| A0A5A7VIS9 Retrotrans_gag domain-containing protein | 5.1e-75 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYF+ TNTVTE++K+TLATM+L EDAKLWWRS++MDIQEGRC+IDTW+ LK+EL S FPENVEILAR KL L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
+KD + +W K K+ +
Subjt: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
Query: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
ED+ ++E E ++ A++++ LQK E KGGL+YV WIN KSTMVDS AT+NF+ + +ARRL L W+ D+GKMKA+NS+ALPI ++
Subjt: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
Query: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
DDFDVVLG+EFLLEH+VIP+ A CL I GS T+V I+QPN KMISA+QL ++ A E +GA E ET
Subjt: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
Query: TPQDTLCILQKCQEVDNLSHP
P+DTLC+ +KC V S P
Subjt: TPQDTLCILQKCQEVDNLSHP
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| A0A5D3D3G4 Retrotrans_gag domain-containing protein | 5.1e-75 | 41.81 | Show/hide |
Query: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
+EQYF+ TNTVTE++K+TLATM+L EDAKLWWRS++MDIQEGRC+IDTW+ LK+EL S FPENVEILAR KL L+H ++EYVK+F GL+LDIRDMS
Subjt: MEQYFRVTNTVTEDSKITLATMHLREDAKLWWRSQFMDIQEGRCSIDTWNRLKQELCSPLFPENVEILARHKLWKLRHADIVQEYVKEFVGLILDIRDMS
Query: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
+KD + +W K K+ +
Subjt: KKD--------ISNW-KGKVVITVI---------------------------------------------------------------------------
Query: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
ED+ ++E E ++ A++++ LQK E KGGL+YV WIN KSTMVDS AT+NF+ + +ARRL L W+ D+GKMKA+NS+ALPI ++
Subjt: -TEDDTREVEENETPQVGALRFLVVLQKNIEESKESQKGGLMYVYFWINHGSTKSTMVDSRATYNFMFKVKARRLNLCWDGDAGKMKAINSMALPITRVI
Query: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
DDFDVVLG+EFLLEH+VIP+ A CL I GS T+V I+QPN KMISA+QL ++ A E +GA E ET
Subjt: ---------------------DDFDVVLGLEFLLEHKVIPIHLANCLVIIGSTSTIVHTKIKQPNEMKMISALQLKKNLAHES-------VGATE---ET
Query: TPQDTLCILQKCQEVDNLSHP
P+DTLC+ +KC V S P
Subjt: TPQDTLCILQKCQEVDNLSHP
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