; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011788 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011788
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:18494731..18494895
RNA-Seq ExpressionPI0011788
SyntenyPI0011788
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060531.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1369.81Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN
        M NAD+ KD+DEGDSTYATT GDDI Y+E+S++W +W+DD A+EIFSEW LRN
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN

TYK00771.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1369.81Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN
        M NAD+ KD+DEGDSTYATT GDDI Y+E+S++W +W+DD A+EIFSEW LRN
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN

TYK27175.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1166.67Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN D+  ++DE DST+ATT  DDI Y+E+S+EWS+WRDD AEE+FSEW+LRNQ
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]2.6e-1370.37Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN   + DVDEGDSTYAT GGDDIQ+VE+S+EW++WRDD A E+F+EWQLRN+
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

XP_031741750.1 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucumis sativus]4.9e-1268.52Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN D + DVDEGDSTYAT GGDDIQ+VE+S+EW++ RDD A E+F+EWQL N+
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7SYE7 Putative nuclease HARBI17.0e-1266.67Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN D+  ++DE DST+ATT  DDI Y+E S+EWS+WRDD AEE+FSEW+LRNQ
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

A0A5A7U2U5 Retrotransposon protein7.0e-1266.67Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN D+  ++DE DST+ATT  DDI Y+E+S+EWS+WRDD AEE+FSEW+LRNQ
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

A0A5A7V485 Putative nuclease HARBI14.8e-1369.81Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN
        M NAD+ KD+DEGDSTYATT GDDI Y+E+S++W +W+DD A+EIFSEW LRN
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN

A0A5D3BLS5 Putative nuclease HARBI14.8e-1369.81Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN
        M NAD+ KD+DEGDSTYATT GDDI Y+E+S++W +W+DD A+EIFSEW LRN
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRN

A0A5D3DV38 Retrotransposon protein7.0e-1266.67Show/hide
Query:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ
        MTN D+  ++DE DST+ATT  DDI Y+E+S+EWS+WRDD AEE+FSEW+LRNQ
Subjt:  MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATGCCGATGTAATAAAGGACGTCGACGAAGGTGACTCAACATATGCAACGACTGGAGGTGATGACATTCAGTATGTTGAGAGCTCGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCAGAGGAGATATTCAGTGAATGGCAATTGCGGAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAATGCCGATGTAATAAAGGACGTCGACGAAGGTGACTCAACATATGCAACGACTGGAGGTGATGACATTCAGTATGTTGAGAGCTCGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCAGAGGAGATATTCAGTGAATGGCAATTGCGGAATCAGTAG
Protein sequenceShow/hide protein sequence
MTNADVIKDVDEGDSTYATTGGDDIQYVESSDEWSKWRDDKAEEIFSEWQLRNQ