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PI0011795 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011795
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:13408422..13408607
RNA-Seq ExpressionPI0011795
SyntenyPI0011795
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033325.1 protein Ycf2-like [Cucumis melo var. makuwa]4.1e-0763.04Show/hide
Query:  MAEDREKRIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENS
        M ED+E+R++R++DK Y E K V++ IWID  RGK+GPSNKEKENS
Subjt:  MAEDREKRIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENS

TrEMBL top hitse value%identityAlignment
A0A5A7SVZ4 Protein Ycf2-like2.0e-0763.04Show/hide
Query:  MAEDREKRIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENS
        M ED+E+R++R++DK Y E K V++ IWID  RGK+GPSNKEKENS
Subjt:  MAEDREKRIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENS

A0A5A7SW90 Reverse transcriptase7.9e-0454.72Show/hide
Query:  RIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENSLPSNMRSFDLHLSQ
        R++  + K Y E   V++EIWIDA RGK+ P  K+KENS  S   SFDLHLSQ
Subjt:  RIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENSLPSNMRSFDLHLSQ

A0A5D3E4V0 Reverse transcriptase7.9e-0454.72Show/hide
Query:  RIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENSLPSNMRSFDLHLSQ
        R++  + K Y E   V++EIWIDA RGK+ P  K+KENS  S   SFDLHLSQ
Subjt:  RIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENSLPSNMRSFDLHLSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGATAGGGAAAAACGAATAAGAAGAGCAGATGATAAACCCTATATAGAGGAGAAGCTAGTAACATCAGAAATATGGATAGATGCAACAAGAGGAAAAATAGG
ACCATCAAACAAAGAGAAAGAAAATTCACTTCCATCAAACATGCGATCGTTTGACTTGCATCTGAGTCAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGATAGGGAAAAACGAATAAGAAGAGCAGATGATAAACCCTATATAGAGGAGAAGCTAGTAACATCAGAAATATGGATAGATGCAACAAGAGGAAAAATAGG
ACCATCAAACAAAGAGAAAGAAAATTCACTTCCATCAAACATGCGATCGTTTGACTTGCATCTGAGTCAGACTTGA
Protein sequenceShow/hide protein sequence
MAEDREKRIRRADDKPYIEEKLVTSEIWIDATRGKIGPSNKEKENSLPSNMRSFDLHLSQT