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PI0011809 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011809
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like protein
Genome locationchr06:28160784..28161263
RNA-Seq ExpressionPI0011809
SyntenyPI0011809
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052771.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]1.7e-0749.4Show/hide
Query:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH
        ID +QM  WREE   S  RG S R  +   ER+++            EK  GF++  ELGDCCVCYEELK   KEVSRI CGH
Subjt:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH

KAE8650076.1 hypothetical protein Csa_011336 [Cucumis sativus]3.5e-2674.47Show/hide
Query:  QIDHIQMYFWREEEQSS-VRRG-NSERRGVVVEERVVLEAAPARRRTG--------EREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH
        +IDHI+MYFW EEE+ S V RG NSERRGVVVEERVVLE  P RRR G        EREKKGGFD+R ELGDC VC EELKDVRKEVSRIRCGH
Subjt:  QIDHIQMYFWREEEQSS-VRRG-NSERRGVVVEERVVLEAAPARRRTG--------EREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH

TYK19474.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa]3.9e-1771.43Show/hide
Query:  QIDHIQMYFWREEEQSS-VRRGNSE---RRGVVVEERVVLEAAPARRR-TGEREKKGGFDQRG-ELGDCCVCYEELK
        +IDHIQMYFW EEE+ S V RGN+    RRGVVVEERVVLE  PARRR   ERE+KGGFD+RG +LGDCCVC EEL+
Subjt:  QIDHIQMYFWREEEQSS-VRRGNSE---RRGVVVEERVVLEAAPARRR-TGEREKKGGFDQRG-ELGDCCVCYEELK

XP_038876865.1 putative RING-H2 finger protein ATL53 [Benincasa hispida]8.2e-2370Show/hide
Query:  QIDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKK----GGFDQ--RGELGDCCVCYEELKDVRKEVSRIRCGH
        +IDH+QM FW EEE+SSV   N ERRG+VVEER VLE APARRR  ERE K      FD+  R E+GDCCVCYEEL DVRKEVSRIRCGH
Subjt:  QIDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKK----GGFDQ--RGELGDCCVCYEELKDVRKEVSRIRCGH

XP_038905732.1 E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]8.5e-1258.43Show/hide
Query:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTG----EREKKGGFDQ-RG-ELGDCCVCYEELKDVRKEVSRIRCGH
        IDHI+M FWRE+   S       RRGVV EE V+LE AP RR       ER K+  FD  RG ELGDCCVC EELK+ +KEVSRI CGH
Subjt:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTG----EREKKGGFDQ-RG-ELGDCCVCYEELKDVRKEVSRIRCGH

TrEMBL top hitse value%identityAlignment
A0A0A0L2F8 Uncharacterized protein6.8e-0760.94Show/hide
Query:  QIDHIQMYFWREEEQSS-VRRG-NSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGD
        +IDHI+MYFW EEE+ S V RG NSERRGVVVEERVVLE  P RRR       G    RG  G+
Subjt:  QIDHIQMYFWREEEQSS-VRRG-NSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGD

A0A5D3BYE9 RING finger protein 165-like protein8.0e-0849.4Show/hide
Query:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH
        ID +QM  WREE   S  RG S R  +   ER+++            EK  GF++  ELGDCCVCYEELK   KEVSRI CGH
Subjt:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH

A0A5D3D7E9 E3 ubiquitin-protein ligase RNF181-like protein1.9e-1771.43Show/hide
Query:  QIDHIQMYFWREEEQSS-VRRGNSE---RRGVVVEERVVLEAAPARRR-TGEREKKGGFDQRG-ELGDCCVCYEELK
        +IDHIQMYFW EEE+ S V RGN+    RRGVVVEERVVLE  PARRR   ERE+KGGFD+RG +LGDCCVC EEL+
Subjt:  QIDHIQMYFWREEEQSS-VRRGNSE---RRGVVVEERVVLEAAPARRR-TGEREKKGGFDQRG-ELGDCCVCYEELK

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like1.4e-0446.43Show/hide
Query:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVL-EAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH
        ID+IQM FWREE +  V      RRGV+VEE+VVL EA  A      ++  GG     E   C  CY+E K   KEV++I CGH
Subjt:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVL-EAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like3.1e-0443.68Show/hide
Query:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLE----AAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH
        ID+IQM FWREE +  V      RRGV+VEER+VL+    AA        ++  GG     E   C  CY+E K   KEV++I CGH
Subjt:  IDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLE----AAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVSRIRCGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGCGAAATTTACATCGCTCAATTGCTTTCATCCTTCAACCTCGGCACCGTAACCTCTGGAATCATCTCTCGGAAGATTACGTCGATCGTCAAATCGATCATAT
CCAAATGTACTTCTGGAGGGAGGAGGAGCAGAGTTCGGTTCGGAGAGGGAATAGTGAGAGGCGTGGCGTTGTGGTGGAGGAGAGGGTGGTTCTAGAGGCAGCTCCGGCGA
GGAGAAGGACGGGGGAGAGGGAGAAAAAGGGTGGGTTTGATCAGAGAGGAGAGTTGGGGGATTGTTGTGTTTGTTACGAAGAACTGAAGGATGTGAGGAAGGAGGTGAGT
AGAATCAGGTGTGGTCATAAGGGAAATAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTGCGAAATTTACATCGCTCAATTGCTTTCATCCTTCAACCTCGGCACCGTAACCTCTGGAATCATCTCTCGGAAGATTACGTCGATCGTCAAATCGATCATAT
CCAAATGTACTTCTGGAGGGAGGAGGAGCAGAGTTCGGTTCGGAGAGGGAATAGTGAGAGGCGTGGCGTTGTGGTGGAGGAGAGGGTGGTTCTAGAGGCAGCTCCGGCGA
GGAGAAGGACGGGGGAGAGGGAGAAAAAGGGTGGGTTTGATCAGAGAGGAGAGTTGGGGGATTGTTGTGTTTGTTACGAAGAACTGAAGGATGTGAGGAAGGAGGTGAGT
AGAATCAGGTGTGGTCATAAGGGAAATAGTATTTGA
Protein sequenceShow/hide protein sequence
MPLRNLHRSIAFILQPRHRNLWNHLSEDYVDRQIDHIQMYFWREEEQSSVRRGNSERRGVVVEERVVLEAAPARRRTGEREKKGGFDQRGELGDCCVCYEELKDVRKEVS
RIRCGHKGNSI