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PI0011813 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011813
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:19919196..19919441
RNA-Seq ExpressionPI0011813
SyntenyPI0011813
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-2882.5Show/hide
Query:  EFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        EF NDQLKTIT WPKEK ATEVELR EVVKQLQDIP+LRS+DR KLM+I+FRSV+ IEGFLSIPT+LKLEYCN+LLE NV
Subjt:  EFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-2578.21Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLE
        +EF NDQLK I  WPKEK ATEVELRAEV+KQLQDIPEL+SRDR KL++I+FRSV+ IEGFLSIPTE KLEYCN+LL+
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLE

KAA0040620.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-2679.01Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        +E  NDQLK I YWPK+K ATEVELRA+VVKQLQDIPELRSR RVKLM+IIF SVD IEGFL  PT+LKLEYCNVLLE+N+
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.3e-2677.78Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        MEF NDQLK I  WPKEK ATEVEL  EVVKQLQDIPEL+S+DR KLM+I+FRSV+ IEGFLSIP ELKLEYCN+LL+ NV
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

KAA0065769.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-2579.01Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        MEF NDQLK I  W KEK ATEVEL A VVKQLQDIP+LRSRDR KLM+I+FRSV+ I+GFLSIPT+LKLEYCNVLLE NV
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI11.3e-2578.21Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLE
        +EF NDQLK I  WPKEK ATEVELRAEV+KQLQDIPEL+SRDR KL++I+FRSV+ IEGFLSIPTE KLEYCN+LL+
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLE

A0A5A7V8C5 Putative nuclease HARBI12.6e-2677.78Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        MEF NDQLK I  WPKEK ATEVEL  EVVKQLQDIPEL+S+DR KLM+I+FRSV+ IEGFLSIP ELKLEYCN+LL+ NV
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

A0A5D3BBW3 Putative nuclease HARBI15.7e-2679.01Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        MEF NDQLK I  W KEK ATEVEL A VVKQLQDIP+LRSRDR KLM+I+FRSV+ I+GFLSIPT+LKLEYCNVLLE NV
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

A0A5D3BZU3 Retrotransposon protein2.7e-2882.5Show/hide
Query:  EFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        EF NDQLKTIT WPKEK ATEVELR EVVKQLQDIP+LRS+DR KLM+I+FRSV+ IEGFLSIPT+LKLEYCN+LLE NV
Subjt:  EFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

A0A5D3C1H4 Retrotransposon protein8.8e-2779.01Show/hide
Query:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV
        +E  NDQLK I YWPK+K ATEVELRA+VVKQLQDIPELRSR RVKLM+IIF SVD IEGFL  PT+LKLEYCNVLLE+N+
Subjt:  MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGTAAATGATCAATTAAAAACAATTACATATTGGCCAAAAGAAAAGCATGCAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAACAACTGCAAGATATCCC
TGAACTACGGAGCCGAGATAGGGTAAAGCTTATGCGAATCATATTTCGTAGTGTGGATGACATAGAGGGATTCTTGTCAATTCCAACAGAACTTAAATTGGAGTATTGCA
ATGTTCTCTTGGAAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGTAAATGATCAATTAAAAACAATTACATATTGGCCAAAAGAAAAGCATGCAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAACAACTGCAAGATATCCC
TGAACTACGGAGCCGAGATAGGGTAAAGCTTATGCGAATCATATTTCGTAGTGTGGATGACATAGAGGGATTCTTGTCAATTCCAACAGAACTTAAATTGGAGTATTGCA
ATGTTCTCTTGGAAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MEFVNDQLKTITYWPKEKHATEVELRAEVVKQLQDIPELRSRDRVKLMRIIFRSVDDIEGFLSIPTELKLEYCNVLLEENV