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PI0011824 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011824
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:18807811..18808053
RNA-Seq ExpressionPI0011824
SyntenyPI0011824
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]1.4e-1867.69Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNF
        M   QVNAA SS Q+V QVD++GC+ FG PH  DACPLN EIVA++++DPYSNT NP WRNHPNF
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNF

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]5.2e-1854.43Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG
        M ++QVN   SS+  V  V ++ CVG  G +NTD CP NT+++ + +NDPYSNT N  WRNH NF WGG GQ NQGR G
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]7.5e-1761.76Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG
        M + +VN A+S +  V QV +LGCVG GGPHNTD CP NTE VA+++NDPY NT N  WRNH NF WG
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]3.4e-1768.97Show/hide
Query:  LGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG
        +GCVG+G PHNT+ CPLNTEIVA+++NDPYSNT N  WR HPNF WGG    NQGR G
Subjt:  LGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]8.6e-1360.94Show/hide
Query:  QVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG
        QVNAA S + A+ QV +LGCVG  GPHNT+ACP N EI A ++   +SNT N  WRNHPNF WG
Subjt:  QVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein2.5e-1854.43Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG
        M ++QVN   SS+  V  V ++ CVG  G +NTD CP NT+++ + +NDPYSNT N  WRNH NF WGG GQ NQGR G
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG

A0A5A7VE68 Uncharacterized protein3.7e-1761.76Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG
        M + +VN A+S +  V QV +LGCVG GGPHNTD CP NTE VA+++NDPY NT N  WRNH NF WG
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG

A0A5D3BYZ5 Uncharacterized protein1.6e-1768.97Show/hide
Query:  LGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG
        +GCVG+G PHNT+ CPLNTEIVA+++NDPYSNT N  WR HPNF WGG    NQGR G
Subjt:  LGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHG

A0A5D3CGY4 Uncharacterized protein4.2e-1360.94Show/hide
Query:  QVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG
        QVNAA S + A+ QV +LGCVG  GPHNT+ACP N EI A ++   +SNT N  WRNHPNF WG
Subjt:  QVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWG

A0A5D3CSC7 Uncharacterized protein6.7e-1967.69Show/hide
Query:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNF
        M   QVNAA SS Q+V QVD++GC+ FG PH  DACPLN EIVA++++DPYSNT NP WRNHPNF
Subjt:  MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAGGTTAATGCCGCCAGAAGCTCTATGCAGGCGGTGAATCAAGTTGATGATTTGGGATGCGTGGGGTTCGGTGGTCCTCACAATACTGATGCATGCCC
ACTTAACACTGAAATTGTCGCGTTTATAAGAAACGACCCTTACTCCAACACCAATAATCCTAGTTGGAGGAATCACCCTAACTTTGGATGGGGAGGAATGGGTCAACAAA
ACCAAGGGCGACATGGTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAGGTTAATGCCGCCAGAAGCTCTATGCAGGCGGTGAATCAAGTTGATGATTTGGGATGCGTGGGGTTCGGTGGTCCTCACAATACTGATGCATGCCC
ACTTAACACTGAAATTGTCGCGTTTATAAGAAACGACCCTTACTCCAACACCAATAATCCTAGTTGGAGGAATCACCCTAACTTTGGATGGGGAGGAATGGGTCAACAAA
ACCAAGGGCGACATGGTAGTTAA
Protein sequenceShow/hide protein sequence
MAISQVNAARSSMQAVNQVDDLGCVGFGGPHNTDACPLNTEIVAFIRNDPYSNTNNPSWRNHPNFGWGGMGQQNQGRHGS