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PI0011831 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011831
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr05:9473178..9473882
RNA-Seq ExpressionPI0011831
SyntenyPI0011831
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035596.1 hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]4.1e-0450Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTK
        M VV K Y A  +  EF V I G+ V F+ EAIN LYDLPND E      +  PTK
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTK

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]1.4e-0442.62Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARE
        + VV+K Y AK +  +    I    + F+AEAIN LYDLPND+E  GH  +  PT+ + +E
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARE

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]1.8e-0443.75Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        + VV K Y + LN  E+ V + G+++ FN EAIN LYDLP D ET     + +  K+ ARE  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]7.0e-0443.75Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        M VV K Y  K N  +  + I      FN E IN LY+ PND E LG E V   TK +A+E  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]7.0e-0443.75Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        M VV K Y  K N  +  + I      FN E IN LY+ PND E LG E V   TK +A+E  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

TrEMBL top hitse value%identityAlignment
A0A5A7T079 Uncharacterized protein2.0e-0450Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTK
        M VV K Y A  +  EF V I G+ V F+ EAIN LYDLPND E      +  PTK
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTK

A0A5A7U4E3 Uncharacterized protein3.4e-0440.62Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        + V+ K Y + LN  E+ V + G+++ FN EAIN LYDLP D +T     + +  K+ ARE  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

A0A5A7U8H4 Uncharacterized protein6.8e-0542.62Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARE
        + VV+K Y AK +  +    I    + F+AEAIN LYDLPND+E  GH  +  PT+ + +E
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARE

A0A5A7URT6 Uncharacterized protein8.9e-0543.75Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        + VV K Y + LN  E+ V + G+++ FN EAIN LYDLP D ET     + +  K+ ARE  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

A0A5A7V6M5 Gag/pol protein3.4e-0443.75Show/hide
Query:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK
        M VV K Y  K N  +  + I      FN E IN LY+ PND E LG E V   TK +A+E  K
Subjt:  MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGTAGAAAAATTATACGCCGCTAAGCTCAATGCTGAGGAGTTTAGCGTGGAAATCAGTGGAAGGGCGGTGAGCTTCAACGCGGAGGCCATCAACACTTTATA
TGACTTGCCCAATGATGTTGAAACGCTTGGGCATGAATACGTGGTCAGCCCAACCAAGAAAATGGCCCGTGAAAGATGGAAAGGCGGTCAAAGACATTGGGTGATACAGA
GGACGAAGGCGCGACCCAGGCAGATCGCAAAACGAAAGCCCCTACCACTGCATCAACTCCTCAACCAAAAGTCAAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGTAGAAAAATTATACGCCGCTAAGCTCAATGCTGAGGAGTTTAGCGTGGAAATCAGTGGAAGGGCGGTGAGCTTCAACGCGGAGGCCATCAACACTTTATA
TGACTTGCCCAATGATGTTGAAACGCTTGGGCATGAATACGTGGTCAGCCCAACCAAGAAAATGGCCCGTGAAAGATGGAAAGGCGGTCAAAGACATTGGGTGATACAGA
GGACGAAGGCGCGACCCAGGCAGATCGCAAAACGAAAGCCCCTACCACTGCATCAACTCCTCAACCAAAAGTCAAAAAATTAA
Protein sequenceShow/hide protein sequence
MSVVEKLYAAKLNAEEFSVEISGRAVSFNAEAINTLYDLPNDVETLGHEYVVSPTKKMARERWKGGQRHWVIQRTKARPRQIAKRKPLPLHQLLNQKSKN