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PI0011838 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011838
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationchr11:28164392..28164999
RNA-Seq ExpressionPI0011838
SyntenyPI0011838
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4492.78Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]2.6e-48100Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]7.7e-4898.97Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLL NAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.0e-4492.78Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]7.9e-4593.81Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQV KM TV SRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.3e-48100Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

A0A1S3C787 auxin-responsive protein SAUR21-like3.7e-4898.97Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLL NAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like3.7e-4898.97Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLL NAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

A0A6J1FVH4 auxin-responsive protein SAUR21-like5.0e-4592.78Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

A0A6J1JGW3 auxin-responsive protein SAUR21-like3.8e-4593.81Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        MGIRLPSLLLNAKQV KM TV SRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.1e-2459.77Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.1e-2460.92Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.6e-2458.62Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T ++      PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.6e-2459.77Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.7e-2459.77Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.0e-2656.12Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
        M IR+  +L ++KQ+ K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI+L SRL  S
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

AT4G34810.1 SAUR-like auxin-responsive protein family1.8e-2654.29Show/hide
Query:  MGIRLPSLLLNAKQVFKMHTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ+ K++++++RN+        VPKGH+AVYVG   ++E+KRFVVP+S+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQVFKMHTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family2.3e-2655.67Show/hide
Query:  MGIRLPSLLLNAKQVFK----MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQ+ +    + + SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQVFK----MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR

AT5G18030.1 SAUR-like auxin-responsive protein family1.5e-2560.92Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.5e-2559.77Show/hide
Query:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTTTTCAAAATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTTTA
CGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAATATCCTGA
mRNA sequenceShow/hide mRNA sequence
CATCCTCATTTCAAATACAACACCTCCCAACTTCTAATCTGCATTCCAGCAGAAAGCCTTTAAAAATTCGTCATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAA
GCAAGTTTTCAAAATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCAC
TATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTC
TTCATCAATCTCACATCCAGGCTGCAAATATCCTGAAAGAGAGAAGAAAGACATTTCTCCACACAATTTTGTCAGATTCCCTCCATTTTTTCCCCGTAGTTAAGAGTAGA
AATCATTAACAAATGTGTAGTTAGTTTCAAAGTGTTAATGATCGGGTAGCTGAAAGGTGATAACACATTGCCCATCTACCTGAACATCATTTACACAACTTACAATTCAA
ATCTGTAAACATGGAAATAGAAATACAGAGTCATATTATCTTACTAAAAGGACTTCCC
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS