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PI0011840 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011840
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor PAR1-like
Genome locationchr12:2344197..2344448
RNA-Seq ExpressionPI0011840
SyntenyPI0011840
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055213.1 transcription factor PAR1-like [Cucumis melo var. makuwa]2.5e-3192.59Show/hide
Query:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQG
        MALADLMANSS  CHHNVA SS KRKRREAREVRRKVQKLRWVVPGGRGLRREHLFA+TAYYILHL+LKVCALESVLKLQG
Subjt:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQG

KAE8124179.1 hypothetical protein FH972_019086 [Carpinus fangiana]1.3e-0651.28Show/hide
Query:  ALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL
        A  DL   S       V      R +R  R V+ KVQKL+ +VPGG GL+ ++LFA+TA YILHLRL+V ALESVL+L
Subjt:  ALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL

KAG6573044.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1668.35Show/hide
Query:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL
        MA  DL+ NS+SS + NVA S LKRKRREARE+RRKVQKLRWVV GGR LRREHLFAKTA YIL+L   +     VL L
Subjt:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL

KAG6584233.1 hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2283.33Show/hide
Query:  SSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQGEA
        SSCH NV A  LKRKRREAR+VRRKVQKLRWVVPGGRGL++EHLFAKTA+YILHLRLKVCAL+++LKLQ EA
Subjt:  SSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQGEA

KAG7019830.1 hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2283.33Show/hide
Query:  SSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQGEA
        SSCH NV A  LKRKRREAR+VRRKVQKLRWVVPGGRGL++EHLFAKTA+YILHLRLKVCAL+++LKLQ EA
Subjt:  SSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQGEA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU9 UBC core domain-containing protein2.2e-0957.5Show/hide
Query:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQ
        MALADLMANSSSSCHH+V ASSLKRKRREAREVRRKVQKLR  +          LF+ + +  L       A+ S+L L+
Subjt:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQ

A0A438EHL0 BHLH domain-containing protein3.0e-0654.24Show/hide
Query:  SSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL
        S  K +RR  R VRRKV+KL+ ++PGGRGL+ + LF +TA YILHLRL+V  L+++ K+
Subjt:  SSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL

A0A438JND2 BHLH domain-containing protein3.0e-0654.24Show/hide
Query:  SSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL
        S  K +RR  R VRRKV+KL+ ++PGGRGL+ + LF +TA YILHLRL+V  L+++ K+
Subjt:  SSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL

A0A5A7UGX9 Transcription factor PAR1-like1.2e-3192.59Show/hide
Query:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQG
        MALADLMANSS  CHHNVA SS KRKRREAREVRRKVQKLRWVVPGGRGLRREHLFA+TAYYILHL+LKVCALESVLKLQG
Subjt:  MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQG

A0A5N6RR97 Uncharacterized protein6.1e-0751.28Show/hide
Query:  ALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL
        A  DL   S       V      R +R  R V+ KVQKL+ +VPGG GL+ ++LFA+TA YILHLRL+V ALESVL+L
Subjt:  ALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAGCAGATTTGATGGCTAATTCTAGTTCCTCTTGCCATCACAATGTGGCTGCTTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGTAAAGT
TCAAAAGCTCCGGTGGGTGGTCCCCGGTGGTCGAGGGTTGCGACGGGAACATCTATTCGCTAAAACGGCTTATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTG
AAAGTGTTCTCAAATTGCAGGGAGAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAGCAGATTTGATGGCTAATTCTAGTTCCTCTTGCCATCACAATGTGGCTGCTTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGTAAAGT
TCAAAAGCTCCGGTGGGTGGTCCCCGGTGGTCGAGGGTTGCGACGGGAACATCTATTCGCTAAAACGGCTTATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTG
AAAGTGTTCTCAAATTGCAGGGAGAGGCCTGA
Protein sequenceShow/hide protein sequence
MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRREHLFAKTAYYILHLRLKVCALESVLKLQGEA