CuGenDBv2

Gene ID	PI0011854
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	NUFIP1 domain-containing protein
Genome location	chr07:7379761..7381390
RNA-Seq Expression	PI0011854
Synteny	PI0011854
Gene Ontology terms	GO:0000492 - box C/D snoRNP assembly (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578837.1 hypothetical protein SDJN03_23285, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-21

83.1

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KLTEKQT+CTLVDKEAQLLRQELKEILAKQAELGVEVAEIP EYLSYSEK D+ K+ GD  T+GEEA+GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

XP_004140922.1 uncharacterized protein LOC101213190 [Cucumis sativus]

8.8e-24

88.73

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KLT KQTNCTLVDKEA+LLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG   TLGEEA+ A
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

XP_008456637.1 PREDICTED: uncharacterized protein LOC103496534 isoform X2 [Cucumis melo]

3.6e-25

90.14

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KL EKQTNCTLV++EAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG P TLGEEA GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

XP_016902016.1 PREDICTED: uncharacterized protein LOC103496534 isoform X1 [Cucumis melo]

1.2e-25

91.55

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        QKL EKQTNCTLV++EAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG P TLGEEA GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

XP_038885674.1 uncharacterized protein LOC120075982 [Benincasa hispida]

1.0e-24

88.73

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KLTEKQT+CTLVDKEAQLLR+ELKEILAKQAELGVEVAEIPPEYLSYSEKH+NRK R DP TLGEE KGA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KE87 NUFIP1 domain-containing protein

4.2e-24

88.73

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KLT KQTNCTLVDKEA+LLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG   TLGEEA+ A
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

A0A1S3C3B2 uncharacterized protein LOC103496534 isoform X2

1.7e-25

90.14

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KL EKQTNCTLV++EAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG P TLGEEA GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

A0A1S4E1B3 uncharacterized protein LOC103496534 isoform X1

5.9e-26

91.55

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        QKL EKQTNCTLV++EAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG P TLGEEA GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

A0A5A7SKM0 Putative basic-leucine zipper transcription factor F isoform X1

1.7e-25

90.14

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KL EKQTNCTLV++EAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRG P TLGEEA GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

A0A6J1JY42 uncharacterized protein LOC111488934

8.9e-22

83.1

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA
        +KLTEKQT+CTLVDKEAQLLRQELKEILAKQAELGVEVAEIP EYLSYSEK D+ K+ GD  T+GEEA+GA
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18440.1 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink).

3.8e-09

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDN
        +K  +K  + +++D+EA++ RQ+L+E+LAKQAELGVEVAE+P  YLS +++  N
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDN

AT5G18440.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink).

3.8e-09

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Query:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDN
        +K  +K  + +++D+EA++ RQ+L+E+LAKQAELGVEVAE+P  YLS +++  N
Subjt:  QKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDN

Sequences

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CDS sequence

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ATGGCGCGGAGCACGCTAGAAGAATTACCCGTCATCGATCAACATACAGAAGGTTTGACATACTTTCCTATCCCAGTGCAATTTATGGCTAAGTGTGCATTCGACCTTAT
GTTTAATCAAAAACTCACTGAAAAGCAAACCAACTGCACATTGGTAGATAAGGAGGCTCAGCTTTTGCGACAAGAACTCAAAGAGATTTTAGCAAAGCAGGCTGAATTAG
GAGTGGAAGTTGCAGAAATACCACCAGAGTATCTCTCATATTCAGAGAAACATGACAATCGAAAACAACGTGGAGATCCATTGACATTGGGAGAGGAAGCGAAAGGAGCC
TAA

mRNA sequence

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Protein sequence

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MARSTLEELPVIDQHTEGLTYFPIPVQFMAKCAFDLMFNQKLTEKQTNCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPPEYLSYSEKHDNRKQRGDPLTLGEEAKGA

PI0011854 (gene) of Melon (PI 482460) v1 genome