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PI0011863 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011863
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag protease polyprotein
Genome locationchr04:17649129..17649340
RNA-Seq ExpressionPI0011863
SyntenyPI0011863
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032208.1 gag protease polyprotein [Cucumis melo var. makuwa]6.2e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        R KP C+TCGK+H GR   RT+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
KAA0035480.1 pol protein [Cucumis melo var. makuwa]6.2e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        REKP C+TCGK+H GR    T+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
KAA0038411.1 gag protease polyprotein [Cucumis melo var. makuwa]6.2e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        REKP C+TCGK+H GR    T+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
KAA0039646.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.6e-0864.29Show/hide
Query:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        +REKP C+TCG++H GR    T+ CFKCKQEGHTADRCP ++
Subjt:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
KAA0040473.1 gag protease polyprotein [Cucumis melo var. makuwa]7.3e-0952.78Show/hide
Query:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRC-------PTQVHPSRVG------SLPLIDERSRQ
        MRE+P+C+TCGKYH       T+A FKCKQEGHT DRC         QV P+ +G      SLPLID+RSR+
Subjt:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRC-------PTQVHPSRVG------SLPLIDERSRQ
TrEMBL top hitse value%identityAlignment
A0A5A7SNK4 Gag protease polyprotein3.0e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        R KP C+TCGK+H GR   RT+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
A0A5A7SWR6 Reverse transcriptase3.0e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        REKP C+TCGK+H GR    T+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
A0A5A7TBM2 Gag protease polyprotein3.5e-0952.78Show/hide
Query:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRC-------PTQVHPSRVG------SLPLIDERSRQ
        MRE+P+C+TCGKYH       T+A FKCKQEGHT DRC         QV P+ +G      SLPLID+RSR+
Subjt:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRC-------PTQVHPSRVG------SLPLIDERSRQ
A0A5A7VJX7 Gag protease polyprotein3.0e-0865.85Show/hide
Query:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        R KP C+TCGK+H GR   RT+ CFKC+QEGHTADRCP ++
Subjt:  REKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
A0A5D3B6B4 DNA/RNA polymerases superfamily protein1.8e-0864.29Show/hide
Query:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
        +REKP C+TCG++H GR    T+ CFKCKQEGHTADRCP ++
Subjt:  MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGAAACCTTATTGCAGTACTTGTGGAAAGTACCATTCAGGTCGTCGTTTTTCTAGGACAAAGGCTTGCTTCAAGTGCAAGCAAGAGGGGCACACAGCTGACAG
ATGCCCTACTCAAGTACATCCTAGCAGGGTAGGGTCTTTGCCACTAATCGACGAGAGGTCGAGACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGAAACCTTATTGCAGTACTTGTGGAAAGTACCATTCAGGTCGTCGTTTTTCTAGGACAAAGGCTTGCTTCAAGTGCAAGCAAGAGGGGCACACAGCTGACAG
ATGCCCTACTCAAGTACATCCTAGCAGGGTAGGGTCTTTGCCACTAATCGACGAGAGGTCGAGACAGTAG
Protein sequenceShow/hide protein sequence
MREKPYCSTCGKYHSGRRFSRTKACFKCKQEGHTADRCPTQVHPSRVGSLPLIDERSRQ