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PI0011880 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011880
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-like
Genome locationchr03:9963665..9964177
RNA-Seq ExpressionPI0011880
SyntenyPI0011880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]1.3e-3453.89Show/hide
Query:  FPGREGRKEVLQISKDSRNIKKPPLPIVR----YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDH------------RPQGILSPPPTSL
        FP  EG K +LQIS +SRNIKKPPLP  R     KYE+EP+IINV+TP DF YIVQLLTGDPNRPPP YP  CDH             PQGILSP PTSL
Subjt:  FPGREGRKEVLQISKDSRNIKKPPLPIVR----YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDH------------RPQGILSPPPTSL

Query:  PALLSPNHFTPSPSSHPQ-FCIHHNLQQQWAEAPALSLYSVVNPPA-SASPNFRVPPSP-------FR---TLNTEIPPSFNT---PLCYPPN
          L+SP  FTP PSS  Q F     LQ+   E P LSL    +PP  + SP+   PPSP       FR   ++ TEIPPSF T   P+ +PPN
Subjt:  PALLSPNHFTPSPSSHPQ-FCIHHNLQQQWAEAPALSLYSVVNPPA-SASPNFRVPPSP-------FR---TLNTEIPPSFNT---PLCYPPN

KAE8647157.1 hypothetical protein Csa_018820, partial [Cucumis sativus]1.2e-3257.43Show/hide
Query:  MSFPGREGRKEVLQISKDSRNIKKPPL-PIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHFTPSP
        MS+PGREGRK+VLQISKDS+ IKKPPL P++RYKYE++PKIINVKT +DFTYIVQLLTGDPN PPP YP  C H+ +  LSPP         PN FTP  
Subjt:  MSFPGREGRKEVLQISKDSRNIKKPPL-PIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHFTPSP

Query:  SSHPQFCIHHNLQQQWAEAPALSLYSVVNPPA---SASPNFRVPPSPF
                           PAL LYS++NPP+    ++PNF+VPPSPF
Subjt:  SSHPQFCIHHNLQQQWAEAPALSLYSVVNPPA---SASPNFRVPPSPF

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1041.61Show/hide
Query:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHF
        +P  +  ++ LQISK SR+I KPPLP    I R    KY+V+PKII+VKTP +F YIVQLLTG PN PPP      D     +LSPPP   P    P   
Subjt:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHF

Query:  TPSPSSHPQFCIHHNLQQQWAEAPALSLYSVVNPPAS
              +P  C   ++     E P+   Y +  PPA+
Subjt:  TPSPSSHPQFCIHHNLQQQWAEAPALSLYSVVNPPAS

XP_022959600.1 extensin-like [Cucurbita moschata]2.2e-1047.52Show/hide
Query:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPP-------------PKYPSTCDHRPQGILSPP
        +P  +  ++ LQISK SR+IKKPPLP    I R    KY+V+PKII+VKTP +F YIVQLLTG PN PP             P+ P   D   + +L+PP
Subjt:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPP-------------PKYPSTCDHRPQGILSPP

Query:  P
        P
Subjt:  P

XP_038885909.1 extensin-like [Benincasa hispida]1.1e-4455.14Show/hide
Query:  PGREGRKEVLQISKDSRNIKKP-----------PLPIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTC--------DHRPQGILSPPPT
        P  EGRKE+ QIS +SR IKKP           P P+VR  YE EPKII V+TP DF YIVQLLTGDPNRPPP+YP T         D RPQGILSP PT
Subjt:  PGREGRKEVLQISKDSRNIKKP-----------PLPIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTC--------DHRPQGILSPPPT

Query:  SLPALLSPNHFTPSPSSHP-------------QFCIHHNLQQQWAEAPALSLYSVVN------------PPASASPNFRVPPSPFRTLNTEIPPSFNT--
        SLP L+ P+ FTPSPS  P             + CI  +L ++WAE  ALS Y VV+             P   +PNFRVPPSPFRTLNTEIPPSFNT  
Subjt:  SLPALLSPNHFTPSPSSHP-------------QFCIHHNLQQQWAEAPALSLYSVVN------------PPASASPNFRVPPSPFRTLNTEIPPSFNT--

Query:  -PLCYPPNHFPSNN
         PL +PPNHFP NN
Subjt:  -PLCYPPNHFPSNN

TrEMBL top hitse value%identityAlignment
A0A0A0KCP3 Uncharacterized protein2.3e-4561.14Show/hide
Query:  MSFPGREGRKEVLQISKDSRNIKKPPL-PIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHFTPSP
        MS+PGREGRK+VLQISKDS+ IKKPPL P++RYKYE++PKIINVKT +DFTYIVQLLTGDPN PPP YP  C H+ +  LSPP         PN FTP  
Subjt:  MSFPGREGRKEVLQISKDSRNIKKPPL-PIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHFTPSP

Query:  SSHPQFCIHHNLQQQWAEAPALSLYSVVNPPA---SASPNFRVPPSPFRTLNTEIPPSFN-TPLCYPPNHFPSNN
                           PAL LYS++NPP+    ++PNF+VPPSPFRTLNTEIPP FN TP  YPPNHFP NN
Subjt:  SSHPQFCIHHNLQQQWAEAPALSLYSVVNPPA---SASPNFRVPPSPFRTLNTEIPPSFN-TPLCYPPNHFPSNN

A0A5A7UXK4 Uncharacterized protein6.3e-3553.89Show/hide
Query:  FPGREGRKEVLQISKDSRNIKKPPLPIVR----YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDH------------RPQGILSPPPTSL
        FP  EG K +LQIS +SRNIKKPPLP  R     KYE+EP+IINV+TP DF YIVQLLTGDPNRPPP YP  CDH             PQGILSP PTSL
Subjt:  FPGREGRKEVLQISKDSRNIKKPPLPIVR----YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDH------------RPQGILSPPPTSL

Query:  PALLSPNHFTPSPSSHPQ-FCIHHNLQQQWAEAPALSLYSVVNPPA-SASPNFRVPPSP-------FR---TLNTEIPPSFNT---PLCYPPN
          L+SP  FTP PSS  Q F     LQ+   E P LSL    +PP  + SP+   PPSP       FR   ++ TEIPPSF T   P+ +PPN
Subjt:  PALLSPNHFTPSPSSHPQ-FCIHHNLQQQWAEAPALSLYSVVNPPA-SASPNFRVPPSP-------FR---TLNTEIPPSFNT---PLCYPPN

A0A6J1CL52 protein MKS1-like1.8e-0538.4Show/hide
Query:  RKEVLQISKDSRNIKKPPLPIVR----------------YKYEVEPKIINVKTPLDFTYIVQLLTG--------------DPNRPPPKYPSTCDHRPQGI
        R   L ++KDS  IKKPPLP  R                  YE+ P++ NV    DF   VQ  TG              D   P    P+T  H P GI
Subjt:  RKEVLQISKDSRNIKKPPLPIVR----------------YKYEVEPKIINVKTPLDFTYIVQLLTG--------------DPNRPPPKYPSTCDHRPQGI

Query:  LSPPPTSLPALLSPNHFTPSPSSHP
        LSP PTSLP+ +SPN FTP+P+  P
Subjt:  LSPPPTSLPALLSPNHFTPSPSSHP

A0A6J1H6R4 extensin-like1.1e-1047.52Show/hide
Query:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPP-------------PKYPSTCDHRPQGILSPP
        +P  +  ++ LQISK SR+IKKPPLP    I R    KY+V+PKII+VKTP +F YIVQLLTG PN PP             P+ P   D   + +L+PP
Subjt:  FPGREGRKEVLQISKDSRNIKKPPLP----IVR---YKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPP-------------PKYPSTCDHRPQGILSPP

Query:  P
        P
Subjt:  P

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTCCTGGGAGGGAAGGAAGAAAAGAAGTACTTCAAATCTCCAAGGATTCCCGAAATATCAAGAAGCCGCCACTGCCCATCGTAAGATACAAGTACGAGGTGGA
GCCGAAGATCATTAATGTAAAAACTCCCCTAGACTTCACCTACATCGTCCAACTCCTCACTGGCGACCCCAATCGTCCGCCACCTAAATACCCCTCTACTTGTGATCACC
GCCCACAAGGGATTCTGTCACCGCCTCCCACTTCTCTTCCTGCCCTTCTTTCTCCCAATCATTTTACTCCCTCCCCGTCCTCTCACCCACAATTCTGCATTCATCATAAC
CTTCAACAACAATGGGCAGAGGCACCCGCATTATCGTTATACTCTGTTGTTAATCCTCCGGCGTCAGCGTCTCCCAATTTCAGAGTTCCGCCGTCGCCATTTCGTACGCT
GAATACGGAAATTCCGCCGAGTTTCAACACTCCCCTGTGTTACCCACCCAATCATTTTCCCTCCAACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTCCTGGGAGGGAAGGAAGAAAAGAAGTACTTCAAATCTCCAAGGATTCCCGAAATATCAAGAAGCCGCCACTGCCCATCGTAAGATACAAGTACGAGGTGGA
GCCGAAGATCATTAATGTAAAAACTCCCCTAGACTTCACCTACATCGTCCAACTCCTCACTGGCGACCCCAATCGTCCGCCACCTAAATACCCCTCTACTTGTGATCACC
GCCCACAAGGGATTCTGTCACCGCCTCCCACTTCTCTTCCTGCCCTTCTTTCTCCCAATCATTTTACTCCCTCCCCGTCCTCTCACCCACAATTCTGCATTCATCATAAC
CTTCAACAACAATGGGCAGAGGCACCCGCATTATCGTTATACTCTGTTGTTAATCCTCCGGCGTCAGCGTCTCCCAATTTCAGAGTTCCGCCGTCGCCATTTCGTACGCT
GAATACGGAAATTCCGCCGAGTTTCAACACTCCCCTGTGTTACCCACCCAATCATTTTCCCTCCAACAATTAA
Protein sequenceShow/hide protein sequence
MSFPGREGRKEVLQISKDSRNIKKPPLPIVRYKYEVEPKIINVKTPLDFTYIVQLLTGDPNRPPPKYPSTCDHRPQGILSPPPTSLPALLSPNHFTPSPSSHPQFCIHHN
LQQQWAEAPALSLYSVVNPPASASPNFRVPPSPFRTLNTEIPPSFNTPLCYPPNHFPSNN