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PI0011917 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011917
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:17437634..17438086
RNA-Seq ExpressionPI0011917
SyntenyPI0011917
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]5.5e-2967.01Show/hide
Query:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+PI +YA+PNLY+FNPGIAY  FGENV FEIK +ML M QN GQFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.7e-3367.59Show/hide
Query:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P   AA   N  Y+A D DRPI +YA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN GQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]7.5e-2661.76Show/hide
Query:  MENNNRNAPPPHAAP--EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPG
        M +N  N  P ++A   + N   +AH+LD PI AY + NLY+FN GIAY VFGEN  FE+KPVMLQMIQ  GQF G+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPPPHAAP--EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.7e-3146.11Show/hide
Query:  MERTFRRNRRRARQRQVRRMENNNRNA-----------------PPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQ
        +ERTFRR  R+ +QR+  +    N +A                    HA  + N   +AHD +RP+  YA+PNLYNF PGI  P F  N RFE+KPVMLQ
Subjt:  MERTFRRNRRRARQRQVRRMENNNRNA-----------------PPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQ

Query:  MIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVGT
        M+Q  GQFGG  GEDPH H++SF  IC++F M G+  + +R  LFP +LRDEA++WA + E GE+ T
Subjt:  MIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVGT

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.7e-2847.06Show/hide
Query:  MERTF--RRNRRRARQRQVRRMENNNRNAPPPHAA---PEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHP
        ++ TF  R ++ RA +R++   +NNN  AP  +     P  +  ++A D + PI  YAAPNLY+F+PGI+ P+  EN RFEIKPVM+QMIQN+ QF    
Subjt:  MERTF--RRNRRRARQRQVRRMENNNRNAPPPHAA---PEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHP

Query:  GEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEV
         E+PH H+  F  +C++F +PGI+P  +R  LFP TLRD+AKRWA++LE  E+
Subjt:  GEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEV

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein1.8e-2551.85Show/hide
Query:  NAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA
        N   +AH+L+ PI  YA+P+LY FN GI YP FG N RF++KP ML MIQ   QFGG+  EDP +HI+S Y +C+SFH+P +S E+L    F  TL+D+ 
Subjt:  NAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA

Query:  KRWANALE
        K+W   LE
Subjt:  KRWANALE

A0A5A7UDN8 Uncharacterized protein2.7e-2967.01Show/hide
Query:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+PI +YA+PNLY+FNPGIAY  FGENV FEIK +ML M QN GQFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 18.1e-3467.59Show/hide
Query:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P   AA   N  Y+A D DRPI +YA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN GQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 13.6e-2661.76Show/hide
Query:  MENNNRNAPPPHAAP--EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPG
        M +N  N  P ++A   + N   +AH+LD PI AY + NLY+FN GIAY VFGEN  FE+KPVMLQMIQ  GQF G+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPPPHAAP--EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUK7 Uncharacterized protein2.7e-2150Show/hide
Query:  EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRD
        E N   +A D  R I  YAAP     N GI  P   +   FE+KPVM QM+Q VGQFGG P EDPH HIRSF  +  SF + G+S E LR  LFP +LRD
Subjt:  EPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRD

Query:  EAKRWANALEDGEV
         A+ W N L    V
Subjt:  EAKRWANALEDGEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGTAAGAAGAATGGAAAACAATAACAGAAATGCCCCTCCGCCGCATGCTGCCCCAGAACCAAA
TGCTGCCTACATGGCACATGACTTGGATAGACCGATTATAGCTTATGCAGCACCCAACCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGAAAACGTTA
GGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGTCGGACAATTTGGTGGTCACCCTGGGGAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGC
GCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCCAACGCCTTAGAAGATGGTGA
GGTGGGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGAACCTTTCGGCGTAATCGGCGAAGAGCTAGGCAGAGACAAGTAAGAAGAATGGAAAACAATAACAGAAATGCCCCTCCGCCGCATGCTGCCCCAGAACCAAA
TGCTGCCTACATGGCACATGACTTGGATAGACCGATTATAGCTTATGCAGCACCCAACCTCTACAACTTCAACCCAGGGATCGCTTACCCTGTGTTCGGTGAAAACGTTA
GGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGTCGGACAATTTGGTGGTCACCCTGGGGAGGATCCACACGAGCATATTAGGAGTTTTTACTCCATCTGC
GCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCCAACGCCTTAGAAGATGGTGA
GGTGGGAACATGA
Protein sequenceShow/hide protein sequence
MERTFRRNRRRARQRQVRRMENNNRNAPPPHAAPEPNAAYMAHDLDRPIIAYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNVGQFGGHPGEDPHEHIRSFYSIC
ASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVGT