; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011926 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011926
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease H
Genome locationchr11:8952915..8953934
RNA-Seq ExpressionPI0011926
SyntenyPI0011926
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]2.7e-19395.27Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISP+GKVFPLTAKLCFECTHNIAEYEACIMGLQAA DMS+KKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQY+ KLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHVHREDNRMADALATLAVMFNLNLE ELYPIQITKRD P YCMNIENDNKPWYFDIKQYIKCREYPYGAS+NDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD+EEAKQIM EIHEGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]1.8e-19294.97Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISP+GKVFPLTAKLCFECTHNIAEYEACIMGLQAA DMS+KKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQY+ KLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHVHREDNRMADALATLAVMFNLNLE ELYPIQITKRD P YCMNIENDNKPWYFDIKQYIKCREYPYGAS+NDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD+EEAKQIM EIHEGICGTHANGH MARQI RSGYYWTTMESDCIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]1.0e-19294.97Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNE GHGIGVVLISP+GKVFPLTAKLCFECTHNIAEYEACIMGLQAA DMS+KKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQY+ KLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHVHREDNRMADALATLAVMFNLNLE ELYPIQITKRD P YCMNIENDNKPWYFDIKQYIKCREYPYGAS+NDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD+EEAKQIM EIHEGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

XP_031742240.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus]6.1e-19394.97Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISP+GKVFPLTAKLCFECTHNIAEYEACIMGLQAA DMS+KKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQY+ KLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHVHREDNRMADALATLAVMFNLNLE ELYPIQITKRD P YCMNIENDNKPWYFDIKQYIKCREYPYGAS+NDKRTI+RLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD+EEAKQIM EIHEGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IHAAASPLHVLSAPWPFSLWG+DVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

XP_031742360.1 uncharacterized protein LOC116404324 [Cucumis sativus]8.0e-19394.97Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISP+GKVFPLTAKLCFECTHNIAEYEACIMGLQAA DMS+KKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQY+ KLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHVHREDNRMADALATLAVMFNLNLE ELYPIQITKRD PTYCMNIENDNKPWYFDIKQYIKCREYPYGAS+NDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD+EEAKQIM EIHEGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IHA+ASPLHVLSAPWPF LWG+DVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

TrEMBL top hitse value%identityAlignment
A0A5A7T0A1 Ribonuclease H9.9e-18994.08Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLIS EGKVF LTAKLCFECTHNIAEYEACIMGLQ A DMSIKKLKVLGDSMLVIHQVKEEWE RDAKLVPYSQYVTKLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHV REDNRMADALATLAVMF+LNLE EL+PIQITKRDVP YCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD EEAKQIMT+I+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIH AASPLH+LSAPWPFSLWGMDVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

A0A5A7T1X2 Ribonuclease H6.2e-19194.67Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQ ACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQ FE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHV REDNRMADALATLAVMF+LNLE EL+PIQITKRDVP YCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD EEAKQIMT+I+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIH AAS LH+LSAPWPFSLWGMDVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

A0A5A7T7R4 Ribonuclease H9.2e-18792.6Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGH IGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQ ACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHV REDNRMADALATLAVMF+LNLE EL+PIQITKRDVP YCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKRTIRRLAMNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD EEAKQIM +IHEGIC THANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYMDKIH AASPLH+LSAPWPFSLWGMDVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRF LV+IDYFTKWIE AS+CN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

A0A5A7TRL7 Ribonuclease H4.0e-19093.79Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGL+ ACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHV REDNRMADALATLA+MF+LNLE EL+PIQITKRDVP YCMN+ NDNKPWYFDIKQYIKCREYPY A ENDKRTIR+LAMNFFLSGEV YKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD EEAKQIMT+IHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIH AASPLH+LSAPWPFSLWGMDVIGPIDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGHRFILVAIDYFTKWIEAASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

A0A5D3DMD2 Ribonuclease H3.8e-18893.2Show/hide
Query:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQ ACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
Subjt:  MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN
        KISFDHV REDNRMADALATLAVMF+LNLE EL+PIQITKRDVP YCMN+ NDNKPWYFDIKQYIKCREYPY ASENDKR IRRL MNFFLSGEVLYKRN
Subjt:  KISFDHVHREDNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRN

Query:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK
        HDMVLLRCVD EEAKQIMT+IHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR+CKKCQIYMDKIH AASPLH+ SA WPFSLWGMDVIG IDPK
Subjt:  HDMVLLRCVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPK

Query:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK
        ASNGH FILVAIDYFTKWIE ASYCN+T+GVVLKFIKK
Subjt:  ASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFIKK

SwissProt top hitse value%identityAlignment
P9WLH4 Uncharacterized protein MT22871.4e-0629.41Show/hide
Query:  GASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISF
        G     G+G  VV  +    V   + +     T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I++
Subjt:  GASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISF

Query:  DHVHREDNRMADALATLAV
        + V R  N  AD LA  A+
Subjt:  DHVHREDNRMADALATLAV

P9WLH5 Bifunctional protein Rv2228c1.4e-0629.41Show/hide
Query:  GASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISF
        G     G+G  VV  +    V   + +     T+N+AEY   I GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I++
Subjt:  GASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISF

Query:  DHVHREDNRMADALATLAV
        + V R  N  AD LA  A+
Subjt:  DHVHREDNRMADALATLAV

Q5RBK0 Gypsy retrotransposon integrase-like protein 19.7e-1629.21Show/hide
Query:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR
        I  Y +  EY      +++R IRR A  F    + L+    D    R   V  EE K+++ E HE   G H +G      ++ S YYWT++ +D  ++  
Subjt:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR

Query:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI
         C+ CQ+  + +   A   H+L    P+SL  +D++GP    ++  H + ++  D FTKWI     C+++   V K I
Subjt:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI

Q8K259 Gypsy retrotransposon integrase-like protein 16.9e-1426.97Show/hide
Query:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR
        I  Y +  EY      +++  IRR A  F    + L+    D    R   V  EE K+++ E HE   G H +G      ++ SGYYWT++ +D  ++  
Subjt:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR

Query:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI
         C+ CQ+  + +   A   H+     P+S+  +D++GP    ++  H + ++  D FTKW+     C+++   + K I
Subjt:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI

Q9NXP7 Gypsy retrotransposon integrase-like protein 12.8e-1528.65Show/hide
Query:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR
        I  Y +  EY      +++  IRR A  F    + L+    D    R   V  EE K+++ E HE   G H +G      ++ S YYWT++ +D  ++  
Subjt:  IKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDMEEAKQIMTEIHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR

Query:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI
         C+ CQ+  + +   A   H+L    P+SL  +D++GP    ++  H + ++  D FTKWI     C+++   V K I
Subjt:  ECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKGVVLKFI

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein8.1e-1034.96Show/hide
Query:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        FDGAS  N    G   VL + +G +     +     T+N AEY A I+GL+ A +   K +KV GDS LV  Q+K +W+     L    +    L     
Subjt:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAV
             HV R  N  AD  A LAV
Subjt:  KISFDHVHREDNRMADALATLAV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-1436.59Show/hide
Query:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        FDGAS  N    G G VL + +  V     +     T+N+AEY A ++GL++A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+
Subjt:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAV
             H+ RE N  AD  A  A+
Subjt:  KISFDHVHREDNRMADALATLAV

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-1436.59Show/hide
Query:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        FDGAS  N    G G VL + +  V     +     T+N+AEY A ++GL++A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+
Subjt:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLAV
             H+ RE N  AD  A  A+
Subjt:  KISFDHVHREDNRMADALATLAV

AT5G51080.1 RNase H family protein9.9e-0832.79Show/hide
Query:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        FDGAS  N    G   VL + +G +     +     T+N AEY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L    +   +LS    
Subjt:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLA
             HV R  N  AD  A +A
Subjt:  KISFDHVHREDNRMADALATLA

AT5G51080.2 RNase H family protein9.9e-0832.79Show/hide
Query:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE
        FDGAS  N    G   VL + +G +     +     T+N AEY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L    +   +LS    
Subjt:  FDGAS--NELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFE

Query:  KISFDHVHREDNRMADALATLA
             HV R  N  AD  A +A
Subjt:  KISFDHVHREDNRMADALATLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTCGATGGTGCCTCAAATGAGTTAGGACATGGGATTGGAGTTGTACTAATTTCACCAGAAGGAAAAGTCTTCCCCCTAACGGCTAAGTTGTGTTTTGAGTGCAC
TCACAACATCGCTGAGTATGAGGCCTGCATTATGGGTCTTCAAGCAGCATGCGACATGAGTATTAAAAAATTAAAGGTTTTGGGTGACTCTATGTTAGTAATACATCAAG
TCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGTCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAAATTTCATTTGATCATGTTCATAGGGAA
GACAATCGAATGGCAGATGCATTAGCCACCTTGGCAGTGATGTTTAATCTTAATCTTGAATGTGAACTTTATCCAATCCAAATTACAAAGCGCGATGTACCGACATATTG
TATGAATATTGAAAATGATAATAAGCCATGGTATTTTGACATCAAGCAGTACATAAAGTGTAGAGAATATCCATATGGAGCTTCGGAGAATGACAAACGCACAATAAGAA
GGTTGGCTATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGGAACCATGATATGGTGCTCCTTCGGTGTGTTGATATGGAAGAAGCAAAACAAATTATGACAGAA
ATACATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGATTGCATAAAATATGC
AAGAGAATGTAAAAAGTGTCAAATTTATATGGATAAAATCCATGCAGCGGCATCTCCATTGCATGTCTTGTCAGCACCTTGGCCTTTTTCTTTGTGGGGAATGGATGTTA
TTGGACCCATTGATCCTAAAGCCTCAAACGGTCATCGTTTTATTCTGGTGGCCATTGATTACTTTACTAAGTGGATAGAAGCGGCATCTTATTGCAACATTACAAAAGGA
GTAGTGCTCAAGTTTATAAAAAAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTCGATGGTGCCTCAAATGAGTTAGGACATGGGATTGGAGTTGTACTAATTTCACCAGAAGGAAAAGTCTTCCCCCTAACGGCTAAGTTGTGTTTTGAGTGCAC
TCACAACATCGCTGAGTATGAGGCCTGCATTATGGGTCTTCAAGCAGCATGCGACATGAGTATTAAAAAATTAAAGGTTTTGGGTGACTCTATGTTAGTAATACATCAAG
TCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTGCCTTACAGTCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAAATTTCATTTGATCATGTTCATAGGGAA
GACAATCGAATGGCAGATGCATTAGCCACCTTGGCAGTGATGTTTAATCTTAATCTTGAATGTGAACTTTATCCAATCCAAATTACAAAGCGCGATGTACCGACATATTG
TATGAATATTGAAAATGATAATAAGCCATGGTATTTTGACATCAAGCAGTACATAAAGTGTAGAGAATATCCATATGGAGCTTCGGAGAATGACAAACGCACAATAAGAA
GGTTGGCTATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGGAACCATGATATGGTGCTCCTTCGGTGTGTTGATATGGAAGAAGCAAAACAAATTATGACAGAA
ATACATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGATTGCATAAAATATGC
AAGAGAATGTAAAAAGTGTCAAATTTATATGGATAAAATCCATGCAGCGGCATCTCCATTGCATGTCTTGTCAGCACCTTGGCCTTTTTCTTTGTGGGGAATGGATGTTA
TTGGACCCATTGATCCTAAAGCCTCAAACGGTCATCGTTTTATTCTGGTGGCCATTGATTACTTTACTAAGTGGATAGAAGCGGCATCTTATTGCAACATTACAAAAGGA
GTAGTGCTCAAGTTTATAAAAAAGAGTTGA
Protein sequenceShow/hide protein sequence
MLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFECTHNIAEYEACIMGLQAACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVHRE
DNRMADALATLAVMFNLNLECELYPIQITKRDVPTYCMNIENDNKPWYFDIKQYIKCREYPYGASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDMEEAKQIMTE
IHEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHAAASPLHVLSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNITKG
VVLKFIKKS