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PI0011943 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011943
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:13440869..13441363
RNA-Seq ExpressionPI0011943
SyntenyPI0011943
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.2e-4865.03Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAER+  QSV NL+R S FRRLTT   KE++TC   TTTRP AFERL ++ KKNVQAPR P F+HLG +G H N  S++  K+KE  S   VWR IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         DV+NY  KKFPC+ K  GEI SNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE EG EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]1.2e-4865.03Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAER+  QSV NL+R S FRRLTT   KE++TC   TTTRP AFERL ++ KKNVQAPR P F+HLG +G H N  S++  K+KE  S   VWR IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         DV+NY  KKFPC+ K  GEI SNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE EG EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.2e-4865.03Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAER+  QSV NL+R S FRRLTT   KE++TC   TTTRP AFERL ++ KKNVQAPR P F+HLG +G H N  S++  K+KE  S   VWR IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         DV+NY  KKFPC+ K  GEI SNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE EG EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.2e-4865.03Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAER+  QSV NL+R S FRRLTT   KE++TC   TTTRP AFERL ++ KKNVQAPR P F+HLG +G H N  S++  K+KE  S   VWR IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         DV+NY  KKFPC+ K  GEI SNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE EG EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.2e-4865.03Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAER+  QSV NL+R S FRRLTT   KE++TC   TTTRP AFERL ++ KKNVQAPR P F+HLG +G H N  S++  K+KE  S   VWR IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         DV+NY  KKFPC+ K  GEI SNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE EG EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

TrEMBL top hitse value%identityAlignment
A0A5A7SPY4 RNase H domain-containing protein5.3e-4763.8Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAERK HQS  NLDRRSAF+RLT   K+EK   Q S TT+P AFERLS+T KKN Q PR PN + LG  G HV T S +  K+KE TS  SVW  IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         D+E+  GK+FPC+ KGE EI SNVP + KRKTF+TLNTSQGS KVK  DVILTNPE E  +Q
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

A0A5A7TZS6 Ty3-gypsy retrotransposon protein7.2e-4460.25Show/hide
Query:  EAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKHKD
        E E KGHQS+ +L++RS  +RLTT  KKEK+TCQ  T TRP AFERLS+  +KNVQ    P F+ +G  GPHV TGS +  K+KE TS  SVW  IKH +
Subjt:  EAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKHKD

Query:  VENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
        VEN+ GK+F C+ KGE EIRSNVPS+ KRKTF+TLNTSQGS KVK  DVIL+N E +  +Q
Subjt:  VENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

A0A5A7UVC4 Uncharacterized protein1.0e-4563.98Show/hide
Query:  EAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKHKD
        EAERK HQS  NLD+RSAF+RLT   K+EK  CQ S TT+P AFERLS+T KKN Q PR P  +HL   G HV T S +  K++E TS  SVWR IKH +
Subjt:  EAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKHKD

Query:  VENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
        VE+  GKKFPC+ KGE EI SNV S+ KRKTF+TLNTSQGS KVK  DVILTNPE E  EQ
Subjt:  VENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

A0A5D3DB95 RNase H domain-containing protein5.3e-4763.8Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAERK HQS  NLDRRSAF+RLT   K+EK   Q S TT+P AFERLS+T KKN Q PR PN + LG  G HV T S +  K+KE TS  SVW  IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
         D+E+  GK+FPC+ KGE EI SNVP + KRKTF+TLNTSQGS KVK  DVILTNPE E  +Q
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

A0A5D3DXC7 Reverse transcriptase domain-containing protein4.1e-4764.42Show/hide
Query:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH
        MTEAERK HQS  NLD+RSAF+RLT   K+EK  CQ S TT+P AFERLS+T KKN Q PR P  + LG  G HV T S +  K+KE TS   VW  IKH
Subjt:  MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKH

Query:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ
          VE+  GK+FPC+ KGE EIRSNVPS+ KRKTF+TLNTSQGS KVK  DVILTNPE E  EQ
Subjt:  KDVENYSGKKFPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGGCAGAAAGAAAGGGTCACCAGTCAGTGCTTAACCTTGATCGACGTTCAGCCTTTCGAAGGCTAACTACGCCCTCTAAAAAGGAGAAAAACACATGTCAGGT
TTCAACGACTACAAGACCATTAGCCTTTGAAAGGCTAAGCATGACTAATAAGAAAAATGTACAAGCACCACGTACACCAAATTTCGATCATCTTGGGTATCGAGGCCCAC
ACGTCAACACTGGTTCCGACGTAGGTGCAAAGGAGAAGGAACAGACATCTCACTCGTCAGTTTGGCGTCACATTAAGCATAAAGACGTTGAGAATTATTCTGGTAAGAAG
TTTCCTTGTGATCCAAAGGGAGAGGGAGAAATTCGTAGTAATGTTCCTTCTCAAACAAAAAGAAAAACCTTTATTACTCTCAACACAAGTCAAGGCTCGCAAAAGGTGAA
AATGTGTGACGTTATACTAACTAATCCTGAAAATGAAGGCTTAGAACAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAGGCAGAAAGAAAGGGTCACCAGTCAGTGCTTAACCTTGATCGACGTTCAGCCTTTCGAAGGCTAACTACGCCCTCTAAAAAGGAGAAAAACACATGTCAGGT
TTCAACGACTACAAGACCATTAGCCTTTGAAAGGCTAAGCATGACTAATAAGAAAAATGTACAAGCACCACGTACACCAAATTTCGATCATCTTGGGTATCGAGGCCCAC
ACGTCAACACTGGTTCCGACGTAGGTGCAAAGGAGAAGGAACAGACATCTCACTCGTCAGTTTGGCGTCACATTAAGCATAAAGACGTTGAGAATTATTCTGGTAAGAAG
TTTCCTTGTGATCCAAAGGGAGAGGGAGAAATTCGTAGTAATGTTCCTTCTCAAACAAAAAGAAAAACCTTTATTACTCTCAACACAAGTCAAGGCTCGCAAAAGGTGAA
AATGTGTGACGTTATACTAACTAATCCTGAAAATGAAGGCTTAGAACAGGAATAA
Protein sequenceShow/hide protein sequence
MTEAERKGHQSVLNLDRRSAFRRLTTPSKKEKNTCQVSTTTRPLAFERLSMTNKKNVQAPRTPNFDHLGYRGPHVNTGSDVGAKEKEQTSHSSVWRHIKHKDVENYSGKK
FPCDPKGEGEIRSNVPSQTKRKTFITLNTSQGSQKVKMCDVILTNPENEGLEQE