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PI0011945 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011945
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box/LRR-repeat protein
Genome locationchr09:2226311..2226726
RNA-Seq ExpressionPI0011945
SyntenyPI0011945
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.3e-3288.24Show/hide
Query:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PPSLFLFLFIILLTTTPL AARR  ASAP PENDSL PPTT+TFSF QPPA V+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2074.42Show/hide
Query:  MASQNSIPPSLFLFLFIILLTTT-PLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQN I  SL LFLFIILLTTT PLSA RR S +   PENDSL PPTTS FSF QPP TVE+Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNSIPPSLFLFLFIILLTTT-PLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0956.96Show/hide
Query:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAG
        MAS N     L LFL  ILLTT  LSA     A A  P NDSL PPT+STFS  + P  VED I  +N+ VSLRKVPAG
Subjt:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]1.4e-2987.64Show/hide
Query:  MASQNSIPP-SLFLFLFIILL-TTTPLSAARRFSASAPLPEND--SLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPP SLFLFLF+ILL TTTPL AARR   SAP PEND  SLHPPTTSTFSFTQPPA VEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPP-SLFLFLFIILL-TTTPLSAARRFSASAPLPEND--SLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein6.8e-3087.64Show/hide
Query:  MASQNSIPP-SLFLFLFIILL-TTTPLSAARRFSASAPLPEND--SLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPP SLFLFLF+ILL TTTPL AARR   SAP PEND  SLHPPTTSTFSFTQPPA VEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPP-SLFLFLFIILL-TTTPLSAARRFSASAPLPEND--SLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein1.1e-3288.24Show/hide
Query:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PPSLFLFLFIILLTTTPL AARR  ASAP PENDSL PPTT+TFSF QPPA V+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACTCCATTCCTCCTTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCTCCGCCGCCCGCCGTTTCTCCGCCTCCGCGCCACT
ACCGGAAAATGATTCTCTCCACCCACCCACCACCTCAACATTTTCATTCACACAGCCGCCGGCCACCGTGGAAGACCAAATCACTTCCCGAAACTACGGCGTTTCACTCC
GCAAAGTCCCCGCCGGACCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
TTAAAAACAGTACCTCTCAAATAAAAATGGCTTCTCAAAACTCCATTCCTCCTTCTCTCTTCCTCTTCCTCTTCATAATTCTCCTCACCACCACCCCTCTCTCCGCCGCC
CGCCGTTTCTCCGCCTCCGCGCCACTACCGGAAAATGATTCTCTCCACCCACCCACCACCTCAACATTTTCATTCACACAGCCGCCGGCCACCGTGGAAGACCAAATCAC
TTCCCGAAACTACGGCGTTTCACTCCGCAAAGTCCCCGCCGGACCCAACCCACTTCATAACTAATCGAATCAACCTCCGATCTTAAGGGAAAAATTATTCAATGTGAAGG
TCTCTCGTAACAAATCTTCCACACAGGTTCGAAATCCAAATTTCGAATTCTCAGTTTTACTGCCAGTCACATTATTTTAATTAGAA
Protein sequenceShow/hide protein sequence
MASQNSIPPSLFLFLFIILLTTTPLSAARRFSASAPLPENDSLHPPTTSTFSFTQPPATVEDQITSRNYGVSLRKVPAGPNPLHN