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PI0011948 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011948
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein
Genome locationchr02:23866562..23874318
RNA-Seq ExpressionPI0011948
SyntenyPI0011948
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039746.1 F-box protein [Cucumis melo var. makuwa]2.7e-1362.3Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFNG++YATF++D  T    +QVWRM EKD WI+EFVI+DIPN+W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

KAA0039747.1 F-box protein [Cucumis melo var. makuwa]8.8e-1260.66Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFN ++YATFF++  T   ++QVWRM EKD WIREFVI DIP +W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

TYK24751.1 F-box protein [Cucumis melo var. makuwa]2.7e-1362.3Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFNG++YATF++D  T    +QVWRM EKD WI+EFVI+DIPN+W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

XP_038875053.1 F-box protein At3g07870-like [Benincasa hispida]4.7e-1365Show/hide
Query:  LHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        L+QFNGTIYATF ++  T  KT QVWRM E +SWIR FVI+DIPNDW+ ++L+K  EDGE
Subjt:  LHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]2.3e-1259.32Show/hide
Query:  LHQFNGTIYATFFVDLPT-KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        + QFN ++YA F ++ PT  ++QVWRM EKD WIREFV++DIPNDW  + L+KA EDGE
Subjt:  LHQFNGTIYATFFVDLPT-KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

TrEMBL top hitse value%identityAlignment
A0A0A0LWG1 F-box domain-containing protein4.7e-1156.67Show/hide
Query:  LHQFNGTIYATFFV--DLPTKTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +HQFNGTIYATF +  +  ++T+QVWRM EKDSW+R+FVI DI  +W  ++L+K  ED E
Subjt:  LHQFNGTIYATFFV--DLPTKTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

A0A1S3CCE7 uncharacterized protein LOC1034990684.2e-1260.66Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFN ++YATFF++  T   ++QVWRM EKD WIREFVI DIP +W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

A0A5A7TCF3 F-box protein1.3e-1362.3Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFNG++YATF++D  T    +QVWRM EKD WI+EFVI+DIPN+W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

A0A5A7TE00 F-box protein4.2e-1260.66Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFN ++YATFF++  T   ++QVWRM EKD WIREFVI DIP +W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

A0A5D3DMB7 F-box protein1.3e-1362.3Show/hide
Query:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE
        +L QFNG++YATF++D  T    +QVWRM EKD WI+EFVI+DIPN+W S+ L+KA EDGE
Subjt:  ALHQFNGTIYATFFVDLPT--KTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTTGCATCAATTCAATGGAACTATTTATGCAACTTTCTTTGTTGACTTGCCAACAAAGACTGTTCAAGTGTGGAGGATGCTAGAGAAAGATTCATGGATAAG
GGAATTTGTTATTAATGACATACCAAATGATTGGGAGTCTATCAAGCTAGTCAAAGCCTCTGAAGATGGGGAGAGTGTTCAACCGGAGACATCTCAATCTTTCTCACCAG
CACTACTGCAAATCGTTACCTGGCATTGGGATTTGAGTCTCTTAGTGTTTGGTGACCATTGGAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTTGCATCAATTCAATGGAACTATTTATGCAACTTTCTTTGTTGACTTGCCAACAAAGACTGTTCAAGTGTGGAGGATGCTAGAGAAAGATTCATGGATAAG
GGAATTTGTTATTAATGACATACCAAATGATTGGGAGTCTATCAAGCTAGTCAAAGCCTCTGAAGATGGGGAGAGTGTTCAACCGGAGACATCTCAATCTTTCTCACCAG
CACTACTGCAAATCGTTACCTGGCATTGGGATTTGAGTCTCTTAGTGTTTGGTGACCATTGGAGATTTTGA
Protein sequenceShow/hide protein sequence
MDALHQFNGTIYATFFVDLPTKTVQVWRMLEKDSWIREFVINDIPNDWESIKLVKASEDGESVQPETSQSFSPALLQIVTWHWDLSLLVFGDHWRF