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PI0011973 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011973
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr01:8351656..8352036
RNA-Seq ExpressionPI0011973
SyntenyPI0011973
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]9.4e-2256.07Show/hide
Query:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSE-SVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI
        FP D ES N  E +GWD CEE+   ELF  +EF  E     +LKEVN V    KFE LD+QTKGE K + S E+PP+++LK L NHLKYAY  ENDTLP+
Subjt:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSE-SVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI

Query:  IISAHLN
         I AHL+
Subjt:  IISAHLN

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]3.8e-2358.88Show/hide
Query:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI
        FP D E+ NV E +GW+  E++   ELF  EEF  E   S +LKEVNVV   +KFE LD+Q KGEKK KPS E+PPE++LKSL NHLKY Y  ENDTLP+
Subjt:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI

Query:  IISAHLN
         IS HL+
Subjt:  IISAHLN

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.7e-2658.12Show/hide
Query:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSL
        M  ND+EIKFN + ++KFP +   YN  ES+GWD C+E+   ELF  EEF  E   S +L+EVNV+    KFE LD++TKG+KKIK S E+PPEI+LK L
Subjt:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSL

Query:  SNHLKYAYFGENDTLPI
         NHLKYAY GENDTL I
Subjt:  SNHLKYAYFGENDTLPI

KAA0062401.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-2463.27Show/hide
Query:  ESIGWDCCEEDVIVELFGLEE-FNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPIIISAHLNAD
        ES+GWD C+E+V VELF  EE F  E S+ +L+EVNVV+  RKFEPLD+QTKG+KKIKP  ++P E++LKSL NHLKYAY GEN+T  +IISA LN +
Subjt:  ESIGWDCCEEDVIVELFGLEE-FNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPIIISAHLNAD

TYJ96997.1 hypothetical protein E5676_scaffold506G00470 [Cucumis melo var. makuwa]1.1e-2249.6Show/hide
Query:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLS
        M  NDKEIKFNV + +KF  DAE+Y+   ++      +   +    L+    + +E +L E+N +FD  KFEPLD+QTKGEKK K S  +PPE++LK L 
Subjt:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLS

Query:  NHLKYAYFGENDTLPIIISAHLNAD
        NHLK  Y GENDTLP+IIS HL  D
Subjt:  NHLKYAYFGENDTLPIIISAHLNAD

TrEMBL top hitse value%identityAlignment
A0A5A7UE99 Uncharacterized protein8.0e-2758.12Show/hide
Query:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSL
        M  ND+EIKFN + ++KFP +   YN  ES+GWD C+E+   ELF  EEF  E   S +L+EVNV+    KFE LD++TKG+KKIK S E+PPEI+LK L
Subjt:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSL

Query:  SNHLKYAYFGENDTLPI
         NHLKYAY GENDTL I
Subjt:  SNHLKYAYFGENDTLPI

A0A5A7UF79 Uncharacterized protein1.8e-2358.88Show/hide
Query:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI
        FP D E+ NV E +GW+  E++   ELF  EEF  E   S +LKEVNVV   +KFE LD+Q KGEKK KPS E+PPE++LKSL NHLKY Y  ENDTLP+
Subjt:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSES-VLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI

Query:  IISAHLN
         IS HL+
Subjt:  IISAHLN

A0A5A7V9Q0 Reverse transcriptase2.2e-2463.27Show/hide
Query:  ESIGWDCCEEDVIVELFGLEE-FNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPIIISAHLNAD
        ES+GWD C+E+V VELF  EE F  E S+ +L+EVNVV+  RKFEPLD+QTKG+KKIKP  ++P E++LKSL NHLKYAY GEN+T  +IISA LN +
Subjt:  ESIGWDCCEEDVIVELFGLEE-FNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPIIISAHLNAD

A0A5D3BCZ6 Uncharacterized protein5.4e-2349.6Show/hide
Query:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLS
        M  NDKEIKFNV + +KF  DAE+Y+   ++      +   +    L+    + +E +L E+N +FD  KFEPLD+QTKGEKK K S  +PPE++LK L 
Subjt:  MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLS

Query:  NHLKYAYFGENDTLPIIISAHLNAD
        NHLK  Y GENDTLP+IIS HL  D
Subjt:  NHLKYAYFGENDTLPIIISAHLNAD

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein4.6e-2256.07Show/hide
Query:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSE-SVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI
        FP D ES N  E +GWD CEE+   ELF  +EF  E     +LKEVN V    KFE LD+QTKGE K + S E+PP+++LK L NHLKYAY  ENDTLP+
Subjt:  FPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSE-SVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGENDTLPI

Query:  IISAHLN
         I AHL+
Subjt:  IISAHLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCAATGATAAGGAAATCAAGTTCAACGTCTTTGACGCGTTGAAATTCCCTGAGGATGCTGAAAGCTACAACGTAAATGAATCCATTGGGTGGGATTGTTGCGA
GGAAGATGTGATCGTCGAGCTGTTTGGTCTTGAAGAATTCAATTTTGAGTTTTCCGAAAGTGTCCTGAAAGAGGTGAATGTCGTGTTTGACATGAGGAAGTTTGAACCTT
TGGATATGCAAACCAAAGGAGAAAAGAAAATAAAGCCATCAAAAGAGCAGCCACCAGAGATAAAGCTCAAGTCGTTGTCCAACCACCTGAAATATGCATACTTTGGGGAG
AATGACACCTTGCCCATCATCATCTCCGCCCACTTGAATGCTGATTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCAATGATAAGGAAATCAAGTTCAACGTCTTTGACGCGTTGAAATTCCCTGAGGATGCTGAAAGCTACAACGTAAATGAATCCATTGGGTGGGATTGTTGCGA
GGAAGATGTGATCGTCGAGCTGTTTGGTCTTGAAGAATTCAATTTTGAGTTTTCCGAAAGTGTCCTGAAAGAGGTGAATGTCGTGTTTGACATGAGGAAGTTTGAACCTT
TGGATATGCAAACCAAAGGAGAAAAGAAAATAAAGCCATCAAAAGAGCAGCCACCAGAGATAAAGCTCAAGTCGTTGTCCAACCACCTGAAATATGCATACTTTGGGGAG
AATGACACCTTGCCCATCATCATCTCCGCCCACTTGAATGCTGATTCGTAG
Protein sequenceShow/hide protein sequence
MQVNDKEIKFNVFDALKFPEDAESYNVNESIGWDCCEEDVIVELFGLEEFNFEFSESVLKEVNVVFDMRKFEPLDMQTKGEKKIKPSKEQPPEIKLKSLSNHLKYAYFGE
NDTLPIIISAHLNADS