; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011977 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011977
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:4651968..4652760
RNA-Seq ExpressionPI0011977
SyntenyPI0011977
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035005.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.1e-2747.69Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDD----------SFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYI-KKSNPSSQEPAAP
        MA T + EV EH+EQSDSS+SD HWKR LKKAK S DD             T KTPV+RPAEQ  RP AL EEI R KM V  K I    +     P AP
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDD----------SFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYI-KKSNPSSQEPAAP

Query:  LEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAKIQADNLTPLEEY
        L+K+ STHA LR SE PLDTS +Q      PS                                     LRP+IATVLSGI KI AD LTPLEEY
Subjt:  LEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAKIQADNLTPLEEY

KAA0050984.1 hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa]2.8e-2554.78Show/hide
Query:  DREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSK-----------TPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLE
        + E+KEH+++S+S +SDRHWKRPLKKAK SSDD  G              TPV++PA+Q  RP  LLEEIRR KM V  K I   +PSS+    P APL+
Subjt:  DREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSK-----------TPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLE

Query:  KVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY
        KV ST A L+ SE  LDTS +Q     EPS LR EI TVLS I KI AD L PLEEY
Subjt:  KVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]4.8e-2546.46Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD-----------------------------------------------DSFGTSKTPVARPAEQ
        MAP  + EV EH  +SDS++SDRHWKRPLKKAK S D                                               +  GTS+TPV +PAEQ
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD-----------------------------------------------DSFGTSKTPVARPAEQ

Query:  PSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY
          RP  LLEEIRR KM V  K ++  +PSS+E   P A L+KV S HA L+ SE PL  S KQ +   EPS LRPEIATVLSGI KI AD L  LEEY
Subjt:  PSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY

KAE8648075.1 hypothetical protein Csa_018860, partial [Cucumis sativus]4.6e-2856Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQEPAAPL---EKVESTH
        MAPT +++V EH+++SD+++SDRHWKRPLKKA           KTP A+P +   RP ALLEEIRR KMKV  K I+  N  S+  A P+    K  S H
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQEPAAPL---EKVESTH

Query:  ASLRISEPPLDTSRKQIVGPAEPSLRPEIATVLSGIAKIQADNLTPLEEY
        A L+ISEPPL TS KQ     +PSLR EI+T+LSGIAKI AD+LTPLEEY
Subjt:  ASLRISEPPLDTSRKQIVGPAEPSLRPEIATVLSGIAKIQADNLTPLEEY

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]6.6e-2744.81Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD---------------------------DSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNE
        MAP  + EVKEH+++SDSS+SDRHWKRPLKKAK S D                           +  GTSKTPV +PAEQ  RP AL EEIRR KM V  
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD---------------------------DSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNE

Query:  KYIKK-SNPSSQEPAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAK
        K ++  S+     P A L KV STHA L+ SE PL TS KQ +  +EPS                                     LRPEIATVLSGI K
Subjt:  KYIKK-SNPSSQEPAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAK

Query:  IQADNLTPLEEY
        I AD LT LEEY
Subjt:  IQADNLTPLEEY

TrEMBL top hitse value%identityAlignment
A0A0A0KQU9 Uncharacterized protein2.2e-2856Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQEPAAPL---EKVESTH
        MAPT +++V EH+++SD+++SDRHWKRPLKKA           KTP A+P +   RP ALLEEIRR KMKV  K I+  N  S+  A P+    K  S H
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQEPAAPL---EKVESTH

Query:  ASLRISEPPLDTSRKQIVGPAEPSLRPEIATVLSGIAKIQADNLTPLEEY
        A L+ISEPPL TS KQ     +PSLR EI+T+LSGIAKI AD+LTPLEEY
Subjt:  ASLRISEPPLDTSRKQIVGPAEPSLRPEIATVLSGIAKIQADNLTPLEEY

A0A5A7U6Q5 Uncharacterized protein1.4e-2554.78Show/hide
Query:  DREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSK-----------TPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLE
        + E+KEH+++S+S +SDRHWKRPLKKAK SSDD  G              TPV++PA+Q  RP  LLEEIRR KM V  K I   +PSS+    P APL+
Subjt:  DREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSK-----------TPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLE

Query:  KVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY
        KV ST A L+ SE  LDTS +Q     EPS LR EI TVLS I KI AD L PLEEY
Subjt:  KVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY

A0A5A7UGW6 PMD domain-containing protein2.3e-2546.46Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD-----------------------------------------------DSFGTSKTPVARPAEQ
        MAP  + EV EH  +SDS++SDRHWKRPLKKAK S D                                               +  GTS+TPV +PAEQ
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD-----------------------------------------------DSFGTSKTPVARPAEQ

Query:  PSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY
          RP  LLEEIRR KM V  K ++  +PSS+E   P A L+KV S HA L+ SE PL  S KQ +   EPS LRPEIATVLSGI KI AD L  LEEY
Subjt:  PSRPPALLEEIRRDKMKVNEKYIKKSNPSSQE---PAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-LRPEIATVLSGIAKIQADNLTPLEEY

A0A5D3BT42 Putative mitochondrial protein2.5e-2747.69Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDD----------SFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYI-KKSNPSSQEPAAP
        MA T + EV EH+EQSDSS+SD HWKR LKKAK S DD             T KTPV+RPAEQ  RP AL EEI R KM V  K I    +     P AP
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDD----------SFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYI-KKSNPSSQEPAAP

Query:  LEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAKIQADNLTPLEEY
        L+K+ STHA LR SE PLDTS +Q      PS                                     LRP+IATVLSGI KI AD LTPLEEY
Subjt:  LEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAKIQADNLTPLEEY

A0A5D3C3D7 PMD domain-containing protein3.2e-2744.81Show/hide
Query:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD---------------------------DSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNE
        MAP  + EVKEH+++SDSS+SDRHWKRPLKKAK S D                           +  GTSKTPV +PAEQ  RP AL EEIRR KM V  
Subjt:  MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSD---------------------------DSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNE

Query:  KYIKK-SNPSSQEPAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAK
        K ++  S+     P A L KV STHA L+ SE PL TS KQ +  +EPS                                     LRPEIATVLSGI K
Subjt:  KYIKK-SNPSSQEPAAPLEKVESTHASLRISEPPLDTSRKQIVGPAEPS-------------------------------------LRPEIATVLSGIAK

Query:  IQADNLTPLEEY
        I AD LT LEEY
Subjt:  IQADNLTPLEEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGCATCGAGCGA
TGATTCATTTGGTACTTCAAAAACACCAGTTGCCAGGCCGGCTGAACAACCCTCACGTCCTCCTGCTCTTCTCGAAGAGATTCGTCGGGACAAGATGAAGGTGAATGAAA
AATATATTAAAAAATCAAATCCTTCGTCCCAAGAACCCGCAGCGCCTTTAGAGAAGGTCGAATCCACACATGCGTCTCTCAGGATTTCTGAGCCGCCTTTAGACACTTCG
AGAAAGCAGATAGTAGGACCTGCTGAGCCCTCGCTTAGGCCGGAAATAGCAACGGTTCTTTCAGGCATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGCGACCTCTGAAGAAAGCAAAGGCATCGAGCGA
TGATTCATTTGGTACTTCAAAAACACCAGTTGCCAGGCCGGCTGAACAACCCTCACGTCCTCCTGCTCTTCTCGAAGAGATTCGTCGGGACAAGATGAAGGTGAATGAAA
AATATATTAAAAAATCAAATCCTTCGTCCCAAGAACCCGCAGCGCCTTTAGAGAAGGTCGAATCCACACATGCGTCTCTCAGGATTTCTGAGCCGCCTTTAGACACTTCG
AGAAAGCAGATAGTAGGACCTGCTGAGCCCTCGCTTAGGCCGGAAATAGCAACGGTTCTTTCAGGCATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATA
TTGA
Protein sequenceShow/hide protein sequence
MAPTHDREVKEHREQSDSSRSDRHWKRPLKKAKASSDDSFGTSKTPVARPAEQPSRPPALLEEIRRDKMKVNEKYIKKSNPSSQEPAAPLEKVESTHASLRISEPPLDTS
RKQIVGPAEPSLRPEIATVLSGIAKIQADNLTPLEEY