; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012000 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012000
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLOB domain-containing protein
Genome locationchr06:6896676..6897370
RNA-Seq ExpressionPI0012000
SyntenyPI0012000
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-6888.51Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS
        TRAEIA +ASN+QE  QL DFA +PIQGPN IGFSQIGLST AH FNS
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]1.6e-7996.69Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF
        TRAEIACVASNVQEQPQ QDFAFEPIQGPN +GFSQIGLST AHCFNSTFF
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]5.0e-7894.74Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQ-EQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF
        TRAEIACVASNVQ EQPQLQDFAF+PIQGPN +GFSQIGLS+ AHCFNS+FF
Subjt:  TRAEIACVASNVQ-EQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]1.5e-6988.51Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS
        TRAEIA +ASN+ ++ Q QDFA EPIQGPN IGFSQIGLST AH FNS
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]3.6e-6889.19Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS
        TRAEIA +ASN+QE  Q QDFA +PIQGPN IGFSQIGLST AH FNS
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein7.6e-8096.69Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF
        TRAEIACVASNVQEQPQ QDFAFEPIQGPN +GFSQIGLST AHCFNSTFF
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF

A0A0A0LLX6 LOB domain-containing protein3.0e-5273.51Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LRGEAAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAF-EPIQGPNCIGFSQIGLSTQAHCFNSTF
        TRAEIA +ASN ++Q Q +DF F +P  GP        GLST AH     F
Subjt:  TRAEIACVASNVQEQPQLQDFAF-EPIQGPNCIGFSQIGLSTQAHCFNSTF

A0A1S3AY36 LOB domain-containing protein 24-like2.4e-7894.74Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQ-EQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF
        TRAEIACVASNVQ EQPQLQDFAF+PIQGPN +GFSQIGLS+ AHCFNS+FF
Subjt:  TRAEIACVASNVQ-EQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFF

A0A6J1E5I6 LOB domain-containing protein 24-like2.1e-6687.16Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS
        TRAEIA +ASN+QE  Q  DFA +PIQGPN IGFSQIGLST AH FNS
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS

A0A6J1JCD0 LOB domain-containing protein 24-like7.1e-7088.51Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS
        TRAEIA +ASN+ ++ Q QDFA EPIQGPN IGFSQIGLST AH FNS
Subjt:  TRAEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 236.9e-3862.39Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE

Query:  IACVASNVQEQPQLQDF
        IA VA     Q  + DF
Subjt:  IACVASNVQEQPQLQDF

P59468 LOB domain-containing protein 246.9e-3863.25Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE

Query:  IACVASNVQEQPQLQDF
        IA VA     Q Q  DF
Subjt:  IACVASNVQEQPQLQDF

Q8LBW3 LOB domain-containing protein 121.1e-3252.99Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A  +L+FEA  R+ DPVYGCVG IS LQ+++   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR

Query:  AEIACVASNVQEQPQLQ
        AEI C+   +Q +P LQ
Subjt:  AEIACVASNVQEQPQLQ

Q9FKZ3 LOB domain-containing protein 361.0e-2842.25Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L +EA+ R+ DPVYGCVG+IS LQH L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR

Query:  AEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAH
         E+A         P LQ         P     S   + TQ H
Subjt:  AEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAH

Q9SHE9 LOB domain-containing protein 42.8e-3157Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++++EA  R+ DPVYGCVG IS LQ ++ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEI

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 42.0e-3257Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++++EA  R+ DPVYGCVG IS LQ ++ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEI

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein8.1e-3452.99Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A  +L+FEA  R+ DPVYGCVG IS LQ+++   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR

Query:  AEIACVASNVQEQPQLQ
        AEI C+   +Q +P LQ
Subjt:  AEIACVASNVQEQPQLQ

AT3G26620.1 LOB domain-containing protein 234.9e-3962.39Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE

Query:  IACVASNVQEQPQLQDF
        IA VA     Q  + DF
Subjt:  IACVASNVQEQPQLQDF

AT3G26660.1 LOB domain-containing protein 244.9e-3963.25Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAE

Query:  IACVASNVQEQPQLQDF
        IA VA     Q Q  DF
Subjt:  IACVASNVQEQPQLQDF

AT5G66870.1 ASYMMETRIC LEAVES 2-like 17.1e-3042.25Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L +EA+ R+ DPVYGCVG+IS LQH L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTR

Query:  AEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAH
         E+A         P LQ         P     S   + TQ H
Subjt:  AEIACVASNVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATTTTTTCCCCTTTTTTTCCTTCTAATAATCCTCAAAGATTCACCATTGT
TCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATTTAAGAGGAGAAGCAGCAGAAACTTTAATCTTTGAGGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTGTGGCTTCG
AATGTCCAAGAACAGCCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATTGTATTGGGTTCTCTCAAATTGGGCTTTCCACTCAGGCCCATTGTTTTAA
CTCCACCTTTTTTAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATTTTTTCCCCTTTTTTTCCTTCTAATAATCCTCAAAGATTCACCATTGT
TCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATTTAAGAGGAGAAGCAGCAGAAACTTTAATCTTTGAGGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTGTGGCTTCG
AATGTCCAAGAACAGCCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATTGTATTGGGTTCTCTCAAATTGGGCTTTCCACTCAGGCCCATTGTTTTAA
CTCCACCTTTTTTAATTCATAA
Protein sequenceShow/hide protein sequence
MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVAS
NVQEQPQLQDFAFEPIQGPNCIGFSQIGLSTQAHCFNSTFFNS