; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012004 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012004
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr06:11444646..11446240
RNA-Seq ExpressionPI0012004
SyntenyPI0012004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025499.1 uncharacterized protein E6C27_scaffold417G001060 [Cucumis melo var. makuwa]7.0e-3535.33Show/hide
Query:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS
        MV+TR+G Y+      K S      P+ K      HG+R+R                       + T+S   D+IPL++LL  +++P  P P N      
Subjt:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS

Query:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ
         A+              P   D+  D  P           E+ S P    P+  KV+   + ++T++GR++VPL++  VPIDGISFH E  V +WK+V+Q
Subjt:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ

Query:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST
        RRI  E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S   +N FLG  V +   S  PS+++
Subjt:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST

KAA0042876.1 uncharacterized protein E6C27_scaffold44G003910 [Cucumis melo var. makuwa]1.2e-3437.04Show/hide
Query:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPS-----NSDHQQS
        MV+TR+G Y S   VP+               KS++  +  G  +K+V T        ++   S   D++PL+RL+  +++P V + +      SD  Q 
Subjt:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPS-----NSDHQQS

Query:  SAS-------TPTLDDNFTDPPPE----SVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHS
        S+S       TP    N  DP  +    S+S     S  K +   + ++T+ GR+++PL++  VPIDGISFH E +V +WK+V+QRRIA E ++SD HHS
Subjt:  SAS-------TPTLDDNFTDPPPE----SVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHS

Query:  CLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA
        C+++M LI + +L  T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  FS +P  +N  L +
Subjt:  CLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA

TYJ96199.1 uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa]1.6e-3444.56Show/hide
Query:  SDHQQSSASTPTLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVM
        SDH        T+D +     P SV      S  K +   + ++T++GR+++PL++  VPI GISFHHE +V +WK+V+QRRIA E ++S+ HHSC++++
Subjt:  SDHQQSSASTPTLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVM

Query:  TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSSTRPNYDNLRSPVDG
         LI +A L  T+SNVG  YPKLIR+  VN+   F++PSSPDY T+HIRG  F+ SP  +N FLG    D+  +F PSS   P+ D L S + G
Subjt:  TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSSTRPNYDNLRSPVDG

TYK05279.1 uncharacterized protein E5676_scaffold108G00960 [Cucumis melo var. makuwa]4.1e-3536.61Show/hide
Query:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPSNSDHQQSSASTP
        MV+TR+G Y S   VP+               KS++  +  G  +K+V T        ++   S   D++PL+RL+  +++P V + + +++  +   TP
Subjt:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPSNSDHQQSSASTP

Query:  TLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTT
        ++    T+P P         S  K +   + ++T+ GR+++PL++  VPIDGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI + +L  T
Subjt:  TLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTT

Query:  VSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA
        +S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  FS +P  +N  L +
Subjt:  VSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA

XP_008463460.1 PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]7.0e-3535.33Show/hide
Query:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS
        MV+TR+G Y+      K S      P+ K      HG+R+R                       + T+S   D+IPL++LL  +++P  P P N      
Subjt:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS

Query:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ
         A+              P   D+  D  P           E+ S P    P+  KV+   + ++T++GR++VPL++  VPIDGISFH E  V +WK+V+Q
Subjt:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ

Query:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST
        RRI  E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S   +N FLG  V +   S  PS+++
Subjt:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST

TrEMBL top hitse value%identityAlignment
A0A1S3CJR8 uncharacterized protein LOC1035016273.4e-3535.33Show/hide
Query:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS
        MV+TR+G Y+      K S      P+ K      HG+R+R                       + T+S   D+IPL++LL  +++P  P P N      
Subjt:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS

Query:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ
         A+              P   D+  D  P           E+ S P    P+  KV+   + ++T++GR++VPL++  VPIDGISFH E  V +WK+V+Q
Subjt:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ

Query:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST
        RRI  E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S   +N FLG  V +   S  PS+++
Subjt:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST

A0A5A7SJK4 Uncharacterized protein3.4e-3535.33Show/hide
Query:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS
        MV+TR+G Y+      K S      P+ K      HG+R+R                       + T+S   D+IPL++LL  +++P  P P N      
Subjt:  MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLR-----------------------VTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQS

Query:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ
         A+              P   D+  D  P           E+ S P    P+  KV+   + ++T++GR++VPL++  VPIDGISFH E  V +WK+V+Q
Subjt:  SAS-------------TPTLDDNFTDPPP-----------ESVSDPAPQSPT--KVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQ

Query:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST
        RRI  E ++SD HH C+++M LI +A L   +S+VGP+Y +LIRE  VN+P  F++PSSPDY  +HIRGL F+ S   +N FLG  V +   S  PS+++
Subjt:  RRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSST

A0A5A7TLL0 Uncharacterized protein5.8e-3537.04Show/hide
Query:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPS-----NSDHQQS
        MV+TR+G Y S   VP+               KS++  +  G  +K+V T        ++   S   D++PL+RL+  +++P V + +      SD  Q 
Subjt:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPS-----NSDHQQS

Query:  SAS-------TPTLDDNFTDPPPE----SVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHS
        S+S       TP    N  DP  +    S+S     S  K +   + ++T+ GR+++PL++  VPIDGISFH E +V +WK+V+QRRIA E ++SD HHS
Subjt:  SAS-------TPTLDDNFTDPPPE----SVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHS

Query:  CLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA
        C+++M LI + +L  T+S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  FS +P  +N  L +
Subjt:  CLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA

A0A5D3BB19 Uncharacterized protein7.6e-3544.56Show/hide
Query:  SDHQQSSASTPTLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVM
        SDH        T+D +     P SV      S  K +   + ++T++GR+++PL++  VPI GISFHHE +V +WK+V+QRRIA E ++S+ HHSC++++
Subjt:  SDHQQSSASTPTLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVM

Query:  TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSSTRPNYDNLRSPVDG
         LI +A L  T+SNVG  YPKLIR+  VN+   F++PSSPDY T+HIRG  F+ SP  +N FLG    D+  +F PSS   P+ D L S + G
Subjt:  TLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGAHVPDIDHSFHPSSSTRPNYDNLRSPVDG

A0A5D3C4H7 Uncharacterized protein2.0e-3536.61Show/hide
Query:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPSNSDHQQSSASTP
        MV+TR+G Y S   VP+               KS++  +  G  +K+V T        ++   S   D++PL+RL+  +++P V + + +++  +   TP
Subjt:  MVSTRRGYYSSPVPVPK---------------KSVNPHV--GPAVKNVRTNKHGVRLRVTTSSSSQ-DNIPLSRLLNHLSSPAVPAPSNSDHQQSSASTP

Query:  TLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTT
        ++    T+P P         S  K +   + ++T+ GR+++PL++  VPIDGISFH E +V +WK+V+QRRIA E ++SD HHSC+++M LI + +L  T
Subjt:  TLDDNFTDPPPESVSDPAPQSPTKVKSKTKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTT

Query:  VSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA
        +S+V P+ P+LIRE  VN+PT F++P+SP+Y T+HIRG  FS +P  +N  L +
Subjt:  VSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRGLPFSFSPHSLNTFLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCCAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCAGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGTTACTACTTCTTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCTCCTGCTGTCCCTGCTCCTTCCAATTCGGACC
ATCAGCAGTCTTCTGCTTCCACTCCCACTCTTGATGATAATTTCACTGATCCTCCTCCTGAATCGGTTTCGGATCCTGCTCCTCAATCTCCAACCAAAGTTAAATCCAAA
ACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAA
ATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACTGTCT
CTAATGTTGGCCCTTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGA
TTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAA
TTTGAGATCTCCTGTTGATGGTTTGTTATTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCACTCTCATCCATGACCTCA
CAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTGCTTTCTTCAAATCCTGATGCTCCTGCTCCTCACCTCCATCTTAATTACTTTTATATCCAG
CCAAAGGGGGAGAAGCTTGAAGTAATTGCTGAAGGTTTGTTTTGTGTCTGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCACAAGACGAGGTTATTACTCTTCTCCAGTTCCTGTTCCTAAGAAATCTGTCAACCCACATGTTGGTCCCGCAGTAAAAAACGTGCGTACTAACAAACATGG
GGTCCGTTTGCGGGTTACTACTTCTTCCTCGTCTCAAGACAACATTCCTTTATCCCGCCTTCTTAATCACCTTTCCTCTCCTGCTGTCCCTGCTCCTTCCAATTCGGACC
ATCAGCAGTCTTCTGCTTCCACTCCCACTCTTGATGATAATTTCACTGATCCTCCTCCTGAATCGGTTTCGGATCCTGCTCCTCAATCTCCAACCAAAGTTAAATCCAAA
ACTAAAAGAGTGTCTACCCAGTCTGGTCGAAGACAGGTTCCTTTGCATGTGAATCCTGTTCCCATAGATGGCATCTCCTTTCATCACGAGTCTCATGTCCATAAATGGAA
ATACGTGATTCAGAGACGTATTGCTGCAGAGTCAGATGTTTCTGATGATCATCATTCCTGCTTAGCTGTTATGACTCTAATTTCTCAAGCCAAACTTCTGACCACTGTCT
CTAATGTTGGCCCTTACTATCCCAAGCTGATAAGAGAAATGTTTGTCAACATTCCAACGTCTTTTGACAATCCTAGCAGTCCTGATTATCATACCATCCATATCAGAGGA
TTGCCCTTCTCCTTTTCCCCTCATTCCTTGAATACCTTTCTTGGAGCTCATGTTCCTGACATTGACCATTCTTTTCATCCTTCATCTTCCACTCGCCCAAACTATGACAA
TTTGAGATCTCCTGTTGATGGTTTGTTATTTCCTCCCTCTTTAGCCAATCAAGTCCTTCATGTTTTGACCTCTGAGTCTCGCAGCATCAGCACTCTCATCCATGACCTCA
CAGACAGAAGAAACGAGATTGACTCTGTTATCACTTCTGTTCAGTTATTGCTTTCTTCAAATCCTGATGCTCCTGCTCCTCACCTCCATCTTAATTACTTTTATATCCAG
CCAAAGGGGGAGAAGCTTGAAGTAATTGCTGAAGGTTTGTTTTGTGTCTGTTCATAA
Protein sequenceShow/hide protein sequence
MVSTRRGYYSSPVPVPKKSVNPHVGPAVKNVRTNKHGVRLRVTTSSSSQDNIPLSRLLNHLSSPAVPAPSNSDHQQSSASTPTLDDNFTDPPPESVSDPAPQSPTKVKSK
TKRVSTQSGRRQVPLHVNPVPIDGISFHHESHVHKWKYVIQRRIAAESDVSDDHHSCLAVMTLISQAKLLTTVSNVGPYYPKLIREMFVNIPTSFDNPSSPDYHTIHIRG
LPFSFSPHSLNTFLGAHVPDIDHSFHPSSSTRPNYDNLRSPVDGLLFPPSLANQVLHVLTSESRSISTLIHDLTDRRNEIDSVITSVQLLLSSNPDAPAPHLHLNYFYIQ
PKGEKLEVIAEGLFCVCS