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PI0012033 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012033
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:7074183..7078314
RNA-Seq ExpressionPI0012033
SyntenyPI0012033
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.5e-3472.64Show/hide
Query:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV
        MVHLYVTVS VD+ I+LNVE R VEEYVDV+PE DA PVC EEE+VA N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD ++EHDPIIVP+
Subjt:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV

Query:  LCKTAK
        +    K
Subjt:  LCKTAK

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-5854.58Show/hide
Query:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV
        MVHLYVTVS VD+ I+LNVE R VEEYVDV+PE DA PVC EEE+VA N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD+++EHDPIIVP+
Subjt:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV

Query:  LCKTAK--QDIRDIAGPLILLQLWAW---ERFPIVAPQLLHVNDHQLHGRAYGSRWRDQF--CVTRSATH----VVSQYRYMFDLLQPNQRSNNSRLRDI
        +    K   D  D    L++     W    RF    P +                  +QF   VT+  TH    +   Y         + RSNN RLR++
Subjt:  LCKTAK--QDIRDIAGPLILLQLWAW---ERFPIVAPQLLHVNDHQLHGRAYGSRWRDQF--CVTRSATH----VVSQYRYMFDLLQPNQRSNNSRLRDI

Query:  ADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        ADD QQVL+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++
Subjt:  ADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-5051.34Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  ---------------------------------------------------------------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDV
                                                                       RSNN RLR++ADDLQQVL+ICN+NE+YMENIHYMYDV
Subjt:  ---------------------------------------------------------------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDV

Query:  LIVPAPVQRRRARVQEPDELKKLN
         IV APVQ+RR  VQEPD+L++++
Subjt:  LIVPAPVQRRRARVQEPDELKKLN

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.6e-2768.75Show/hide
Query:  VDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK
        V+  I+LNVE R VEEYVDVDPE DA PVC EEE+VA N+Y +FRT+TDDEFEEM+FDG E+E PSNTFT LDM+AVD ++EHDPIIVP++    K
Subjt:  VDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.8e-4847.54Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV
                                                                                           RSNN RL ++ADD QQV
Subjt:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV

Query:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        L+ICNNNE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++
Subjt:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.0e-4747.13Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAG LILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV
                                                                                           RSNN+RLR+IADD QQV
Subjt:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV

Query:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        L+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQE D+L++++
Subjt:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.5e-1567.74Show/hide
Query:  IVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK
        ++A N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD ++EHDPIIVP++    K
Subjt:  IVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-4542.39Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLNNTCKK
                  RSNN RLR++ADD QQVL+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++   K+
Subjt:  ----------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLNNTCKK

TrEMBL top hitse value%identityAlignment
A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.6e-3472.64Show/hide
Query:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV
        MVHLYVTVS VD+ I+LNVE R VEEYVDV+PE DA PVC EEE+VA N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD ++EHDPIIVP+
Subjt:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV

Query:  LCKTAK
        +    K
Subjt:  LCKTAK

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-5854.58Show/hide
Query:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV
        MVHLYVTVS VD+ I+LNVE R VEEYVDV+PE DA PVC EEE+VA N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD+++EHDPIIVP+
Subjt:  MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPV

Query:  LCKTAK--QDIRDIAGPLILLQLWAW---ERFPIVAPQLLHVNDHQLHGRAYGSRWRDQF--CVTRSATH----VVSQYRYMFDLLQPNQRSNNSRLRDI
        +    K   D  D    L++     W    RF    P +                  +QF   VT+  TH    +   Y         + RSNN RLR++
Subjt:  LCKTAK--QDIRDIAGPLILLQLWAW---ERFPIVAPQLLHVNDHQLHGRAYGSRWRDQF--CVTRSATH----VVSQYRYMFDLLQPNQRSNNSRLRDI

Query:  ADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        ADD QQVL+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++
Subjt:  ADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.2e-5151.34Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  ---------------------------------------------------------------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDV
                                                                       RSNN RLR++ADDLQQVL+ICN+NE+YMENIHYMYDV
Subjt:  ---------------------------------------------------------------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDV

Query:  LIVPAPVQRRRARVQEPDELKKLN
         IV APVQ+RR  VQEPD+L++++
Subjt:  LIVPAPVQRRRARVQEPDELKKLN

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-2768.75Show/hide
Query:  VDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK
        V+  I+LNVE R VEEYVDVDPE DA PVC EEE+VA N+Y +FRT+TDDEFEEM+FDG E+E PSNTFT LDM+AVD ++EHDPIIVP++    K
Subjt:  VDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.6e-4947.54Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV
                                                                                           RSNN RL ++ADD QQV
Subjt:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV

Query:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        L+ICNNNE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++
Subjt:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.5e-4847.13Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAG LILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV
                                                                                           RSNN+RLR+IADD QQV
Subjt:  -----------------------------------------------------------------------------------RSNNSRLRDIADDLQQV

Query:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN
        L+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQE D+L++++
Subjt:  LDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLN

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.6e-1567.74Show/hide
Query:  IVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK
        ++A N+Y +FRTETDDEFEEM+FDG E+E PSNTFT+LDMNAVD ++EHDPIIVP++    K
Subjt:  IVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAK

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.2e-4642.39Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------
        LCK +KQ +R+IAGPLILLQ+WAWERFPIVAPQLLHVN +QLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQP+Q                     
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLNNTCKK
                  RSNN RLR++ADD QQVL+ICN+NE+YMENIHYMYDV IVPAPVQRRR  VQEPD+L++++   K+
Subjt:  ----------RSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDVLIVPAPVQRRRARVQEPDELKKLNNTCKK

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog7.3e-0533.72Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAP-QLLHVNDHQLHG------RAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ
        LC+ +K+ +  I GPL+LLQLWAWER  +  P +L  V    + G         G RWR       +    +  YR  FD  +  Q
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAP-QLLHVNDHQLHG------RAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases5.2e-0633.72Show/hide
Query:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAP-QLLHVNDHQLHG------RAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ
        LC+ +K+ +  I GPL+LLQLWAWER  +  P +L  V    + G         G RWR       +    +  YR  FD  +  Q
Subjt:  LCKTAKQDIRDIAGPLILLQLWAWERFPIVAP-QLLHVNDHQLHG------RAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATTTGTACGTGACTGTGAGTAGAGTAGATTCGGGCATCGACTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCGGAGTTAGATGCACA
ACCAGTGTGCAGTGAAGAAGAAATTGTAGCTAATAATGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGGGCGTGAACATGAAT
TTCCCTCAAATACATTCACCGAGTTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTATAGTCCCAGTGTTATGCAAGACAGCAAAACAAGACATTCGT
GATATTGCTGGACCATTAATACTGTTACAGCTATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTTCTACACGTTAATGATCATCAATTACACGGACGAGCTTA
TGGTTCGAGATGGAGAGATCAATTTTGTGTGACCAGGTCGGCTACTCATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCTTCAACCTAATCAGAGGTCGAACAATA
GTAGACTTCGGGATATTGCAGATGATCTACAACAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACTTATTGTACCT
GCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGAAGAAGTTGAACAACACGTGCAAGAAGTATCTTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATTTGTACGTGACTGTGAGTAGAGTAGATTCGGGCATCGACTTAAATGTAGAATCACGACCAGTTGAAGAATATGTTGATGTTGATCCGGAGTTAGATGCACA
ACCAGTGTGCAGTGAAGAAGAAATTGTAGCTAATAATGACTATAGAGATTTTAGAACAGAAACTGATGATGAATTCGAAGAGATGGAATTTGATGGGCGTGAACATGAAT
TTCCCTCAAATACATTCACCGAGTTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTATAGTCCCAGTGTTATGCAAGACAGCAAAACAAGACATTCGT
GATATTGCTGGACCATTAATACTGTTACAGCTATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTTCTACACGTTAATGATCATCAATTACACGGACGAGCTTA
TGGTTCGAGATGGAGAGATCAATTTTGTGTGACCAGGTCGGCTACTCATGTAGTCTCTCAATATAGGTACATGTTTGATCTTCTTCAACCTAATCAGAGGTCGAACAATA
GTAGACTTCGGGATATTGCAGATGATCTACAACAGGTCCTAGATATATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTACTTATTGTACCT
GCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGAAGAAGTTGAACAACACGTGCAAGAAGTATCTTCTGTGA
Protein sequenceShow/hide protein sequence
MVHLYVTVSRVDSGIDLNVESRPVEEYVDVDPELDAQPVCSEEEIVANNDYRDFRTETDDEFEEMEFDGREHEFPSNTFTELDMNAVDSVREHDPIIVPVLCKTAKQDIR
DIAGPLILLQLWAWERFPIVAPQLLHVNDHQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPNQRSNNSRLRDIADDLQQVLDICNNNERYMENIHYMYDVLIVP
APVQRRRARVQEPDELKKLNNTCKKYLL